KEGG   Mycobacterium sp. KMS: Mkms_3351
Entry
Mkms_3351         CDS       T00442                                 
Name
(GenBank) DNA polymerase III, epsilon subunit
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
mkm  Mycobacterium sp. KMS
Pathway
mkm03030  DNA replication
mkm03430  Mismatch repair
mkm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mkm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Mkms_3351
   03430 Mismatch repair
    Mkms_3351
   03440 Homologous recombination
    Mkms_3351
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mkm03032]
    Mkms_3351
   03400 DNA repair and recombination proteins [BR:mkm03400]
    Mkms_3351
Enzymes [BR:mkm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Mkms_3351
DNA replication proteins [BR:mkm03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Mkms_3351
DNA repair and recombination proteins [BR:mkm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Mkms_3351
SSDB
Motif
Pfam: RNase_T GIY-YIG
Other DBs
NCBI-ProteinID: ABL92545
UniProt: A1UI87
LinkDB
Position
3513740..3515632
AA seq 630 aa
MGQGSVGAVGGAAEQLSFDMEALSLRDTTFVVVDLETTGGRATGERPDAITEIGAVKVRG
GEVLGELATLVDPGRAIPPQIVSLTGITTAMVCAAPRIESVLPAFLEFARGSVLVAHNAG
FDIGFLRAAAEQCALTWPRPPVLCTVKLARRVLTRDEAPSVRLSALAQLFRAKTTPTHRA
LDDARATVDVLHGLIERIGNQGVHTYTDLRAYLPDVTPAQRRNRRLADGLPHRPGVYLFR
GPGDEVLYIGTAVDLRRRVGQYFTGADPRARMKEMASLATRVDHVECAHELEAGVRELRL
LAAHAPPYNRRSKFPQRWWWVVLTDEPFPRFSVVRAPRHGSAVGPFRARTDAVQTAELLA
RFTGVRTCTARLARAARHGAACAERELSPCPAPRDIDAAAYAPAHRRAADLIEGRDDAAL
AAVVDGIAALAAVNRYESAARLRDHAATGIDVLWRGQRLRALADQTELVAARPDGSGGWD
LAVVRYGRLAAAGCARRGVPPMPVVDALTAAAQTVLPDPAPLGGALVEETGLITRWLTSP
GVRIVRCEPGYATPIGAAGRWLGWADTARSARLAAEQTGADARTRESVPSELLGEPHPTR
EQLFGRPGVDGLGRPGQARLPGRHPFGVAG
NT seq 1893 nt   +upstreamnt  +downstreamnt
atgggtcagggcagcgtcggtgccgtcgggggcgcggccgagcagctgtcgttcgacatg
gaggcgctgtcgctgcgcgacaccacgttcgtcgtcgtggacctggagaccaccggcggt
cgcgccacgggtgagcgtccggatgcgatcaccgagatcggcgcggtcaaggtccgcggc
ggtgaggtgctcggtgagctcgccaccctggtcgaccccgggcgggcgataccgccgcag
atcgtctcgctgaccggcatcaccaccgcgatggtgtgcgccgccccccgcatcgaatcg
gtgctgcccgcattcctcgagttcgcgcgcggctcggtgctggtggcccacaacgccggc
ttcgacatcggcttcctgcgggcggcggccgaacagtgcgcgctgacctggccccgcccg
ccggtgctgtgcacggtcaagctcgcgcgccgcgtgctcacccgcgacgaggcgcccagc
gtgcggctgtcagcgctggcgcagttgttccgcgcgaagacgacgccgacgcaccgggcc
ctcgacgatgcccgcgccacggtggacgtactgcacgggctgatcgaacggatcggcaac
cagggcgtgcacacctacaccgacctgcgcgcctacctgcccgacgtcacccccgcgcag
cgccgcaaccgccgcctcgccgacggtctgccccaccggccgggggtgtacctgttccgc
ggcccgggcgacgaggtgctctacatcggcaccgcggtggacctgcgccgccgcgtcggc
cagtacttcaccggagccgacccgcgggcgcggatgaaggagatggcgtccctggccacc
cgcgtggaccacgtggaatgcgcccacgaactcgaggcgggcgtgcgtgagctgcgcctg
ctggccgcccatgcgccgccctacaaccggcgttcgaagttcccgcagcgctggtggtgg
gtggtgctgaccgacgagcccttcccgcggttctcggtcgtgcgcgcaccccgtcacggt
tcggcggtcgggccgttccgggcccgcacggacgccgtgcagaccgctgaactgctcgcc
cggttcaccggtgtgcggacctgcaccgcccggctcgcccgcgcggcccggcacggcgcg
gcctgcgccgagcgtgaactgtcaccgtgcccggcgccgcgcgacatcgacgcggcggcc
tacgccccggcccaccgccgcgccgccgacctcatcgagggccgcgacgatgcggcgctg
gccgcggtggtcgacgggatcgccgcgctggcggccgtcaaccggtacgaatcggccgcg
cgcctgcgtgaccacgccgccacgggcatcgacgtgctgtggcgggggcagcgactgcgt
gcgctcgccgaccagaccgagttggtcgcggcccgtccggacggcagcggtggatgggac
ctcgccgtcgtgcggtacggacgcctggccgccgccgggtgcgcccgtcgcggggtgccg
ccgatgccggtcgtcgacgcgctgaccgccgcggcgcagacggtgctgcccgatcccgcc
ccgcttggcggtgcgctggtcgaggagaccgggctgatcacccgctggctcaccagcccc
ggtgtgcggatcgtgcggtgcgaacccgggtacgccacaccgatcggcgcggcgggccgc
tggctgggctgggcggatacggcgcgttcggcacggttggccgccgagcagaccggtgcg
gacgcgaggaccagagagtcggtcccctcagagcttctgggtgaaccgcacccaacgcgc
gagcagcttttcggccgccccggagtcgatggtctcggtcgcccgggccaggcccgcctc
ccaggccggcacccatttggcgtcgctggatag

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