Mycobacterium sp. KMS: Mkms_3944
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Entry
Mkms_3944 CDS
T00442
Name
(GenBank) DNA-3-methyladenine glycosylase II
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
mkm
Mycobacterium sp. KMS
Pathway
mkm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mkm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Mkms_3944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mkm03000
]
Mkms_3944
03400 DNA repair and recombination proteins [BR:
mkm03400
]
Mkms_3944
Enzymes [BR:
mkm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Mkms_3944
Transcription factors [BR:
mkm03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Mkms_3944
DNA repair and recombination proteins [BR:
mkm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Mkms_3944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
UBA_6
Motif
Other DBs
NCBI-ProteinID:
ABL93136
UniProt:
A1UJX8
LinkDB
All DBs
Position
4152463..4154016
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AA seq
517 aa
AA seq
DB search
MAHDHVGFPPVVSVAACKSDSMYDDFDRCYRAVQSKDARFDGWFVTAVLTTRIYCRPSCP
VRPPFARNVRFYPTAAAAQAAGFRACKRCRPDASPGSPEWNVRGDVAARAMRLIADGTVD
RDGVTGLAGRLGYTTRQLQRILQAEVGANPLALARAQRAQTARVLIETTDLPFSDVAFAA
GFSSIRQFNDTVRATSACTPTAMRERARRRFGAATAGAGSLSLRLPVRRPFAYEGVFGHL
AASAVPGVEEFRDGAFRRTLRLSRGHGIVGLTPRDGHVDCVLHLEDLRDLSSAIARCRRL
LDLDADPEAVVDVLGADPDLTALVTKAPGQRIPRTVDEAELAVRVVLGQQVSLKAARTHA
ARLVTHYGRPISDPHGGLTHVFPTVEELADIAAPHLAVPRSRQATVRSLIAALASGDVRL
DPGCDWNEARAQLTVLPGIGTWTAEVIAMRGLGDPDAFPVTDLGVLTAARHLGLAEDARA
LAAHGARWRPWRAYATQHLWTALDHPVNDWPPKEIRQ
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggcgcacgaccatgtcggatttccgccggtggtgtcggtggcggcgtgtaagtctgac
agcatgtacgacgatttcgaccgctgctaccgggccgtgcagtccaaggacgcgcggttc
gacggttggttcgtcacggcggtgctgacgacgcggatctactgccgcccaagctgtccc
gtccggccgccgttcgcccgcaacgtgcgcttctatccgaccgccgcggccgctcaggcg
gcgggattccgcgcctgtaagcggtgcaggcccgacgcgtcgcccggttctcccgagtgg
aacgtccgcggcgatgtggccgccagggcgatgcgcctgatcgccgacggcacggtcgac
cgggacggtgtcacgggtctggccggccggctcggctacaccacgcggcagttgcagcgc
atcctgcaggccgaggtgggggcgaatccgctggcgttggcccgtgcgcagcgggcacag
accgcacgcgtgctgatcgagaccaccgacctgccgttctccgatgtggcgttcgccgcg
gggttctcgagcatccggcagttcaacgacacggtgcgcgccacctccgcgtgcaccccg
accgcgatgcgggagcgggcgcgacgccgcttcggggcggccaccgccggcgcggggtca
ctgtcactgcgcctgccggtgcgtaggccgttcgcctacgaaggggtgttcgggcacctg
gcggccagcgccgtaccgggtgtcgaggagttccgcgacggggccttccgccgcacgctg
cggctttcgaggggccacggcatcgtcggcctcaccccccgcgacggtcacgtcgactgc
gtgctgcacctcgaggaccttcgggacctgtccagcgccatcgcgcggtgccggcgcctg
ctggacctcgacgccgacccggaggccgtcgtcgacgtactcggcgccgacccggacctc
accgcgttggtgacgaaggcgcccgggcagcgcatcccgcgcactgtcgacgaggcggaa
ctggccgtgcgggtggttctgggccaacaggtgtccctgaaggccgcccgcacgcacgcc
gcgcggctcgtcacccactacggtcgcccgatcagcgatccacacggtggcctgacccac
gtgtttcccaccgttgaggaactcgccgacatcgctgcgccccatctggcggtgccgcgc
agccggcaggccaccgtccgctcgctcatcgcggcgctggcgtcgggcgacgtgcggctc
gatcccggatgtgactggaacgaggcacgggcacaactcaccgtactgcccggcatcggc
acatggactgcggaggtgatcgcgatgcgcggactcggcgatcccgacgccttccccgtc
accgatctgggcgtgctcaccgccgctcgccacctcggcctggccgaggatgcccgggcc
cttgcagcgcacggcgcccggtggcgtccgtggcgggcctacgcgacgcagcacctgtgg
acggcgctcgatcatccggtcaacgactggcccccgaaggagatccgacagtga
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