Mycobacterium sp. KMS: Mkms_4416
Help
Entry
Mkms_4416 CDS
T00442
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mkm
Mycobacterium sp. KMS
Pathway
mkm03420
Nucleotide excision repair
mkm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mkm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Mkms_4416
03430 Mismatch repair
Mkms_4416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mkm03400
]
Mkms_4416
Enzymes [BR:
mkm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mkms_4416
DNA repair and recombination proteins [BR:
mkm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mkms_4416
MMR (mismatch excision repair)
Other MMR factors
Mkms_4416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
DEAD
CarD_TRCF_RID
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ABL93607
UniProt:
A1UL99
LinkDB
All DBs
Position
complement(4643190..4645547)
Genome browser
AA seq
785 aa
AA seq
DB search
MSVNVTEPSSRPDDRAEELLDGLNPQQRQAVLHEGSPLLIVAGAGSGKTAVLTRRIAYLL
AARDVGVGQVLAITFTNKAAAEMRERVVHLVGPRARSMWVATFHSTCVRILRNQASLLPG
LNSNFSIYDADDSRRLLLMIGKDMGLDTKKYSPRLLSNGISNLKNELIGPEQAAAEASEA
ADDLARIIADVYAEYQRRLRAANALDFDDLIGETVAVLQRFPQIAQYYRRRFRHILVDEY
QDTNHAQYVLVRELVGGGAHDTGEVAPAELCVVGDADQSIYAFRGATIRNIEDFERDYPN
ATTILLEQNYRSTQTILNAANSVIARNAGRREKRLWTDSGHGELIVGYVADNEHDEARFV
AQEIDRLADDGHSYNDFAVFYRTNNNSRALEEVFIRAGIPYKVVGGVRFYERREIRDIVA
YLRVLDNPGDSVSMRRILNTPRRGIGDRAEACVAVYAENTGASFNDALQAAAEGKVPMLN
TRSEKCIASFVQMLDDLRGRLGDELGELVEAVLDRTGYRAELEASNDPQDLARLDNLNEL
VSVAHEFSIDRANAAALAEDLDEPVDEDIPDTGVLAQFLERVSLVADADDIPEHGSGVVT
MMTLHTAKGLEFPVVFVTGWEDGMFPHMRALGDPNELSEERRLAYVGITRARQRLYLSRA
KVRSSWGQPMLNPESRFLREIPQELIDWRRTDPENRRPSFSAPSRMSSGSSGTSFGAPRP
SPMRSGGGKKPLIVLEPGDRINHDKYGLGRVEEVSGVGESAMSLIDFGSAGRVKLMHNHA
PVQKL
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgaacgtgactgaaccgagttcccggcctgacgacagggccgaggaactcctc
gacggcctcaacccgcagcagcgccaggcggtgctgcacgaggggtcgccgctgctgatc
gtggcgggagcggggtcgggtaagaccgcggtgctgacccgccgaatcgcctacctgctg
gccgcccgcgacgtcggggtcgggcaggtgctggccatcacgttcaccaacaaggccgcc
gccgagatgcgcgaacgcgtcgtccatttggtgggcccgcgcgcgaggtcgatgtgggtg
gcgacgttccactcgacgtgtgtgcgcatcctgcgcaaccaggcgtcgctgctgcccggg
ctgaactccaacttctcgatctacgacgccgacgattcgcggcggctgctgttgatgatc
ggcaaggacatgggcctggacaccaagaagtactcgccccgcctgctgtccaacgggatc
tcgaacctgaagaacgagctgatcgggcccgaacaggccgccgccgaggcgtcggaggcc
gccgacgacctggcccgcatcatcgccgacgtctacgccgagtaccagcgccggctgcgc
gccgccaacgcgctggacttcgacgacctgatcggcgagacggtcgctgtgctgcaacgt
tttccgcagatcgcgcagtactaccgccggcgcttccggcacatcctggtcgacgaatac
caggacaccaaccacgcccagtacgtgctggtgcgcgagctcgtagggggcggcgcccac
gacaccggagaggtggcacccgcggagctctgcgtggtgggcgacgccgaccagtcgatc
tacgcgttccgcggcgcgacgatccgcaacatcgaggacttcgaacgcgactatcccaac
gcgacgaccatcctgctcgagcagaactaccgctccacccagaccatcctcaacgccgcc
aactcggtgatcgcccgcaacgccggccggcgcgagaagcggctgtggacggactccggc
cacggggagctgatcgtcggctacgtcgccgacaacgaacacgacgaggcccggttcgtc
gcgcaggagatcgaccggctggccgatgacggccacagctacaacgatttcgccgtcttc
taccggaccaacaacaactcccgtgcgttggaagaggtgttcatccgcgccggcatcccg
tacaaggtcgtcggcggcgtccggttctacgaacgccgcgagatccgcgacatcgtcgcc
tacctgcgggtactcgacaaccccggcgactcggtgagcatgcgccgcatcctcaacacc
ccgcggcgcgggatcggcgaccgggccgaggcgtgtgtggcggtgtacgccgagaacacc
ggtgccagcttcaacgacgcgctgcaggccgccgccgagggcaaggtgccgatgctcaac
acccgctcggagaagtgcatcgcgagtttcgtgcagatgctcgacgatctgcgcggccgc
ctcggtgacgaactcggcgaactcgtcgaggcggtgctcgaccgcaccggctaccgcgcg
gagctcgaggcgtccaatgatccgcaggacctcgcgcggctggacaacctcaacgaattg
gtcagcgtcgcacacgagttcagcatcgaccgggcgaacgccgcggcgctggccgaagac
ctcgacgaaccggtcgacgaggacatccccgataccggtgtgctggcgcagttcctcgag
cgggtgtcgctggtggccgacgccgacgacatccccgagcacggctcgggcgtcgtcacc
atgatgacgctgcacaccgccaagggactggagttccccgtcgtgttcgtcaccggctgg
gaggacggcatgttcccgcacatgcgggcactcggcgatcccaacgaactgtccgaggaa
cgccggttggcctacgtcggcatcacccgggcccgtcagcggctctatctcagccgggcg
aaggtgcgctcgtcgtgggggcaacccatgctcaacccggagtcgcggttcctgcgggag
atcccgcaggagctcatcgactggcggcgcaccgatcccgagaacagaaggccgtcgttc
agcgcgcccagccggatgtcgtcgggctcctccggtacgagtttcggcgcaccgcgcccg
tcgccgatgcgctcgggtggcggtaagaagccgctgatcgtgctcgaaccgggtgaccgc
atcaaccacgacaagtacggtctgggccgcgtcgaagaggtctcgggcgtcggcgaatcc
gcgatgtcactgatcgacttcggcagcgccggacgcgtcaagctgatgcacaaccacgct
ccggtgcagaagctctaa
DBGET
integrated database retrieval system
