Mycobacterium sp. KMS: Mkms_4882
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Entry
Mkms_4882 CDS
T00442
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mkm
Mycobacterium sp. KMS
Brite
KEGG Orthology (KO) [BR:
mkm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mkm03032
]
Mkms_4882
03400 DNA repair and recombination proteins [BR:
mkm03400
]
Mkms_4882
Enzymes [BR:
mkm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Mkms_4882
DNA replication proteins [BR:
mkm03032
]
Prokaryotic type
DNA Topoisomerases
Mkms_4882
DNA repair and recombination proteins [BR:
mkm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Mkms_4882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
HC2
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
ABL94072
UniProt:
A1UML4
LinkDB
All DBs
Position
complement(5116324..5119197)
Genome browser
AA seq
957 aa
AA seq
DB search
MKNWSRIQLADGSPRGGNGGGEPPARRANGSVRRLVIVESPTKARKIAGYLGSNYIVESS
RGHIRDLPRAAADVPAKYKSEPWARLGVDVEHDFEPLYIISPDKKSTVADLKDKLKNVDE
LYLATDGDREGEAIAWHLLETLKPRIPVKRMVFHEITEPAIRAAAEDPRDLDNDLVDAQE
TRRILDRLYGYEVSPVLWKKVAPKLSAGRVQSVATRIIVQRERERMAFRTAGYWDVSAEL
DASVSDPQATPPTFTAKLNSVDGRRVATGRDFDSLGQVRKPDEVLVLDEAAAGALAAGLQ
AAQLSVSSVEQKPYTRRPYAPFMTSTLQQEAGRKLRFSSERTMSIAQRLYENGYITYMRT
DSTTLSQSAIDAARNQARQLYGEEYVHPTARQYTRKVKNAQEAHEAIRPAGDVFQTPGQL
HAQLDTDEFRLYELIWQRTVASQMADARGTTLSLRIAGDSRDGQSVVFSASGRTITFAGF
LKAYVESIDELAGGESDDAESRLPNLTQGQRVDAKELTPAGHQTSPPARYTEASLIKALE
DLGIGRPSTYSSIIKTIQDRGYVHKKGSALVPSWVAFAVIGLLEQHFGRLVDYGFTAAME
DELDEIASGTERRTNWLKNFYFGGEHGVGDSIARAGGLKKLVGVNLEEIDAREVNSIKLF
DDAEGRPIYVRVGKNGPYLERMVADEENPGELKPQRANLKDELTPDELTLELAEKLFSTP
QEGRTLGVDPETGHEIVAKDGRYGPYVTEVLPAPPEEPEDGAPAKKGKKPTGPKPRTGSL
LRTMDLETVTLDDALKLLSLPRVVGVDPNTGEEITAQNGRYGPYLKRGTDSRSLATEEQM
FTITLDEALKIYAEPKRRGRQGAATPPLRELGVDPVSEKPMVIKDGRFGPYVTDGETNAS
LRKGDDVMSITDARASELLADRRARGPVKKKAAAKKAPAKKTAAKKTAAKKASAKKA
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgaagaattggagcaggatccagttggctgacggtagcccaagaggcggaaacggcggc
ggtgagccgccggcgcgcagagcgaacggcagcgtgcggcgactcgtcattgtcgagtcg
ccgacgaaggcgcgcaaaatcgccggttacctgggctcgaattacatcgtcgaatcgtcg
cgtggacacatccgcgacctgccccgggccgccgctgacgtgcccgcgaagtacaagtcg
gagccgtgggcccgcctcggcgtcgacgtcgaacacgacttcgaaccgctctacatcatc
agcccggacaagaagagcaccgtcgcggatctgaaggacaagctcaagaacgtcgacgag
ctctatctggcgacggacggcgaccgcgagggcgaggccatcgcgtggcacctgctcgaa
acgctcaaaccgcgcatcccggtcaagcggatggtgttccacgagatcaccgagcccgcg
atccgtgcggccgccgaagacccccgcgacctcgacaacgacctggtcgacgcgcaggag
acccgccgcatcctcgaccgcctctacggctacgaggtcagcccggtgctgtggaagaag
gtggcgccgaagctgtcggccggacgcgtgcagtcggtggcgacccggatcatcgtgcag
cgcgaacgtgagcgcatggcgttccgcaccgccggctactgggatgtgagcgccgaactg
gacgccagcgtctccgatccgcaggccaccccgccgacgttcacggcgaaactcaacagc
gtcgacggacgccgcgtggccaccggccgcgatttcgactcgctcggtcaggtgcgcaaa
cccgacgaggtgctggtcctcgacgaggccgccgccggggcgttggcggcgggtctgcag
gctgcgcagctgtcggtgtcctccgtcgagcagaagccctacacgcgcaggccctacgca
ccgttcatgacctcgacgctgcagcaggaggccggccgcaagctgcgcttctcgtcggag
cgcacgatgagcatcgcccagcgcctgtacgagaacggctacatcacctacatgcgtacc
gactcgaccacgctgtcgcagtcggccattgacgcggcgcgcaaccaagcccgccagctc
tacggcgaggagtacgtgcacccgacggcgcgccagtacacccgcaaggtgaagaacgcg
caggaggcccacgaggcgatccgccccgcgggggatgtgttccagacccccgggcagctg
cacgcgcagctcgacaccgacgagttccggctctacgagctgatctggcagcgcaccgtc
gcctcacagatggccgatgcgcgcggcaccacgctgtcgctgcgcatcgccggggactcg
cgggacggacagtcggtggtgttctccgccagcgggcgcaccatcaccttcgccggcttc
ctcaaggcctacgtggagagcatcgacgaactcgccggcggcgagtccgacgacgccgag
agccgcctgccgaacctgacccaggggcagcgcgtcgacgccaaggagctcacccccgcc
gggcaccagaccagcccgcccgcccgctacaccgaggcgtcgctcatcaaggccctcgag
gatctcggcatcggccggccgtcgacctactcgtcgatcatcaagaccatccaggaccgc
ggctacgtccacaagaagggcagcgcgctggtcccgtcgtgggtggcgttcgccgtgatc
gggttgctcgaacagcatttcggccgtctggtggactacgggttcaccgccgcgatggag
gacgaactcgacgagatcgcctccggcaccgagcgaaggaccaactggctcaagaacttc
tacttcggcggtgagcacggcgtcggcgattcgatcgcgcgcgcgggtgggctgaagaag
ctggtcggcgtcaacctcgaggagatcgacgcgcgagaagtcaactccatcaagctcttc
gacgatgcggagggacgtcccatctacgtgcgggtgggcaagaacggcccctacctggag
cggatggtcgccgacgaggagaacccgggtgagctcaaaccccagcgcgccaacctcaaa
gacgagctgacaccggacgagctgaccctcgagctggccgaaaagctgttctccacaccg
caagagggccgcacgctgggcgtcgacccggagaccggacacgagatcgtcgccaaggac
ggccgctacggaccgtatgtgaccgaggtgctgcccgcgcctcccgaggagccggaggac
ggtgcgccggcgaagaagggcaagaagccgaccgggcccaaaccgcggaccggttcgctg
ctgcgcaccatggacctcgagaccgtcacgctcgacgacgcactcaaactgctgtcgctg
ccgcgggtggtgggagtcgatcccaacaccggtgaggagatcaccgcgcagaacggccgg
tacgggccatacctcaagcgcggcaccgactctcggtcgctggccaccgaggagcagatg
ttcaccatcaccctcgacgaggcgttgaagatctacgccgagccgaagcgccgcggccgg
cagggcgcggcgacgccgccgctgcgcgaactgggcgtcgaccctgtctcggagaagccg
atggtgatcaaggacggccgcttcgggccgtacgtcaccgacggtgagaccaacgccagc
ctgcgcaagggcgacgacgtcatgtcgatcaccgatgcgcgcgcctcggaactgctcgcc
gaccggcgggcccgcggaccggtcaagaagaaggccgcggccaagaaggcgccggcgaag
aagaccgcggccaagaagaccgcggcgaagaaggcgtccgccaagaaggcgtag
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