Mycobacterium sp. KMS: Mkms_4989
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Entry
Mkms_4989 CDS
T00442
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mkm
Mycobacterium sp. KMS
Pathway
mkm03030
DNA replication
mkm03430
Mismatch repair
mkm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mkm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Mkms_4989
03430 Mismatch repair
Mkms_4989
03440 Homologous recombination
Mkms_4989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mkm03032
]
Mkms_4989
03400 DNA repair and recombination proteins [BR:
mkm03400
]
Mkms_4989
Enzymes [BR:
mkm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Mkms_4989
DNA replication proteins [BR:
mkm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Mkms_4989
DNA repair and recombination proteins [BR:
mkm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Mkms_4989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
BRCT
Motif
Other DBs
NCBI-ProteinID:
ABL94178
UniProt:
A1UMX0
LinkDB
All DBs
Position
complement(5228865..5229857)
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AA seq
330 aa
AA seq
DB search
MVSHGWGRPAVDTGTGWAVVDVETSGFRPGQARIVSLAALAVGDDGNVEQSLATLLNPGV
DPGPTHVHGLTAEMLEGAPRFGDVVADLAELLRGRTLVAHNVGFDYSFLTAEAELVGAEL
PIDSVMCTVELARRLDLGTENLRLETLAAHWGVPQLKPHDALDDAQVLAQILKPTLARAR
ERRAWLPTRSVSRRRWPNGRVTHDDLHPLRMVAARLPCAYLNPGRYIAGRPLVKGMRVAV
AAEVTRTYEELIERLLTAGLAYTDAVDTETSLVICNQPDVEQGKGYQAQELGVPVLSDAD
FLRALDHVVGGTGIEEFFDATTVGDQFALF
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggtgagccacggttggggaagaccggcggtcgacaccggtacaggctgggccgtcgtc
gatgtcgagacgtcgggtttccggcccgggcaggcgcgcatcgtcagcctggccgcactc
gcggtgggtgacgacggcaacgtcgaacagagcctggccaccctgctgaatccgggtgtc
gacccggggcccacgcatgtgcacgggctgaccgccgagatgctcgagggtgcgccccgc
ttcggtgacgtcgtcgccgacctcgccgaactgctgcgcggtcgcacgctcgtcgcgcac
aacgtcggattcgactactcgttcctgaccgccgaggccgaactcgtcggcgcggaactg
ccgatcgactcggtgatgtgcaccgtcgaactcgcccgccgcctcgacctggggacggag
aacctgcggttggagaccctcgcggcgcactggggtgtgccgcaactcaaaccgcacgat
gcgctcgacgacgctcaggtcctcgcgcagatcctcaaaccgacgctggcgcgcgcccgc
gagcgcagggcctggctgccgacgcgttcggtgagccggcggcggtggcccaacggccgg
gtcacccacgacgacctgcacccgttgaggatggtggccgcgcggctgccctgcgcgtac
ctgaatcccggccgctacatcgcgggccgcccgctggtgaaaggtatgcgcgtcgcggtc
gccgcggaggtcacgcgcacttacgaagagctgatcgagcggttgctcaccgccgggctg
gcctacaccgacgcggtggacacggagacctcactggtcatctgcaaccagcccgatgtc
gaacagggcaagggctaccaggctcaggagctcggcgtcccggtgctctcggacgccgac
ttcctgcgggccctcgaccacgtcgtcgggggcaccggtatcgaggagttcttcgacgcc
accacggtcggcgatcagttcgcgctgttctag
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