Mycobacterium kansasii ATCC 12478: MKAN_19470
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Entry
MKAN_19470 CDS
T02887
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mkn
Mycobacterium kansasii ATCC 12478
Pathway
mkn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mkn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MKAN_19470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mkn03021
]
MKAN_19470
03400 DNA repair and recombination proteins [BR:
mkn03400
]
MKAN_19470
Enzymes [BR:
mkn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MKAN_19470
Transcription machinery [BR:
mkn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MKAN_19470
DNA repair and recombination proteins [BR:
mkn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MKAN_19470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AGZ52227
UniProt:
U5WTH4
LinkDB
All DBs
Position
4269873..4273835
Genome browser
AA seq
1320 aa
AA seq
DB search
MLDVNFFDELRIGLATAEDIRQWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITAVDEEMRHNELSTLEAEMMVERKAVEDQRDADLEARAQKLEAD
LAQLEAEGAKADARRKVRDGGEREMRQLRDRAQRELDRLEDIWNTFTKLAPKQLIVDENL
YRELQDRYGEYFTGAMGAESIQKLIENFDIDAEAESLREVIRSGKGQKKLRALKRLKVVA
AFQQSGNSPMGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PQVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPMLIEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARVLMLSSNNILSPASGRPLAMPRLDMVTGLYYLTTEVDGDTGEYQ
PAAADRPETGVYSSPAEAIMAADRGVLSVRAKIKVRLTQLRPSAEIEAELFGTNGWHPGE
PWIADTTLGRVLFNELLPPGYPFVNKQMHKKVQASIINDLAERYPMIVVAQTVDKLKDAG
FYWATRSGVTVSMADVLVPPRKKEILDRYEDRADKVEKQFQRGALNHDERNEALVEIWKE
ATDEVGQALREHYPSDNPIITIVDSGATGNFTQTRTLAGMKGLVTNPKGEFIPRPVKSSF
REGLTVLEYFINTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREHDCGTERGIVVE
LAERQPGVDGQVTLIRDPYIETSAYARTLGIDAVDEAGNVVVARGEDLGDPEIDALLAAG
ITQVKVRSVLTCTTGTGVCATCYGRSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFH
QGGVGEDITGGLPRVQELFEARVPRGKAPIADVTGRVRLEDGERFYKITIVPDDGSEEVV
YDKLSKRQRLRVFKHEDGSERVLSDGDHVEVGQQLMEGSADPHEVLRVQGPREVQIHLVR
EVQEVYRAQGVSIHDKHIEVIVRQMLRRVTIIDSGSTEFLPGSLIDRAEFEAENRRVVAE
GGEPAAGRPVLMGITKASLATDSWLSAASFQETTRVLTDAAINCRSDKLNGLKENVIIGK
LIPAGTGINRYRNIQVQPTEEARAAAYTIPSYEDQYYSPDFGQATGAAVPLDDYGYSDYR
NT seq
3963 nt
NT seq
+upstream
nt +downstream
nt
gtgctagacgtcaacttcttcgatgaactccgcatcggcctggccaccgcggaggacatc
cggcagtggtcctacggcgaggtcaagaagccggagaccatcaactaccgcacgctcaag
ccggagaaggacggcttgttctgcgagaagatcttcgggccgactcgcgactgggaatgc
tactgcggcaaatacaagcgggtgcgcttcaagggcatcatctgcgagcgttgcggtgtc
gaggtgacacgcgccaaggtgcgccgggaacggatgggccacatcgagttggccgcaccc
gtcacccacatctggtacttcaagggcgtcccgtcgcgcctgggctacctgctggacctg
gcgcccaaggacctcgagaagatcatctacttcgccgcctatgtgatcaccgcggtcgac
gaggagatgcggcacaacgagctgtccaccctcgaggccgaaatgatggtggagcgcaag
gccgttgaggaccagcgggacgcggacttggaagcgcgcgcccaaaagctggaggccgac
ctggcccagctggaggccgagggcgccaaggccgacgcccgacgcaaggttcgcgacggc
ggcgagcgcgagatgcgtcagctgcgcgaccgcgcccagcgcgagctggaccggctggag
gacatctggaacaccttcaccaagctggcccccaagcagctgatcgtcgacgagaacctc
taccgcgaactgcaggaccgctacggcgaatacttcaccggcgccatgggtgcggagtcg
atccagaagctcatcgagaacttcgacatcgacgccgaagccgagtcgctgcgcgaggtc
atccgaagcggcaaggggcagaagaagcttcgcgccctcaagcgcctgaaggtggtcgcc
gctttccagcagtccggcaactcgccgatgggcatggtgctcgacgctgtcccggtgatc
ccgccggagctgcgtcccatggtgcagctcgacggtggccggttcgccaccagcgacctg
aacgacctgtaccgacgggtgatcaaccggaacaaccggctcaagcgactgatcgacctc
ggcgcgcccgagatcatcgtcaacaacgagaagcggatgctgcaggagtcggtcgacgcg
ctgttcgacaacggacgtcgcggtcgaccggtcaccgggccgggcaaccgtccgctcaag
tcgctgagcgatctgctgaagggcaagcagggccggttccggcagaacctgctcggcaag
cgtgtcgactactcgggcaggtccgttatcgtggtcggtccgcaactcaagttgcaccag
tgcggtctgcccaagctgatggcgctggagctgttcaagccgttcgtgatgaagcgtctg
gtcgatctcaaccacgcccagaacatcaagagcgccaagcggatggtggaacgtcagcgt
ccccaggtgtgggatgtgctggaggaggtcatcgccgagcacccggtgttgctgaaccgc
gcgccaaccctgcaccggctcggtatccaggcgttcgagccgatgctgatcgagggcaag
gcgattcagctgcacccgctggtgtgtgaggcgttcaacgccgacttcgacggtgaccag
atggccgtgcacctgccgctgtccgccgaggcacaggcagaggcccgcgtcctgatgctg
tcgtccaacaacatcctctcgcccgcgtccgggcgccccctggccatgccccgactggac
atggtaaccgggttgtactacctgaccaccgaggtcgacggcgacaccggcgaataccag
ccggccgcagcggaccgtcccgagacgggggtgtactcctcgccggcggaagccatcatg
gccgccgaccgcggtgtgctctcggtgcgggccaagatcaaggtgcggctgacccagttg
cgtccgtctgccgagatcgaggccgagctgttcgggaccaacggctggcatccgggcgag
ccctggattgccgacacgacgctggggcgggtgctgttcaacgagttgctgccgccgggc
tatccgttcgtcaacaagcaaatgcacaagaaggttcaggcgtcgatcatcaacgacctg
gccgagcgctacccgatgatcgtggtggcgcagaccgtcgacaagctcaaggacgcgggc
ttctactgggcaacccgaagcggtgtcacggtctcgatggccgacgtgctggttccaccc
cgcaagaaggagatcctcgatcgctacgaggatcgcgccgacaaggtcgaaaagcagttc
cagcgtggcgctttgaaccacgacgaacgcaacgaggccttggtcgagatctggaaggaa
gccaccgacgaggtgggccaggcgctgcgggagcactatcccagcgataacccgatcatc
accatcgtcgactcgggtgctacgggtaacttcacccagacccggacgctggccggaatg
aagggtctggtgaccaaccccaagggtgagttcatcccgcgtccggtcaagtcgtcgttc
cgcgagggcctgaccgtgctcgagtacttcatcaacacccacggtgctcgaaagggcttg
gccgacaccgcgttgcgtaccgccgactcgggctacctgacccgtcgcctggtggacgtg
tcccaggacgtcatcgtgcgcgagcacgactgcggcaccgagcgcggcatcgtcgtcgag
ttggccgagcgtcaacccggggttgatgggcaagtcacgctgatccgtgacccgtacatc
gaaacctcggcgtacgcaaggactttgggtatcgacgcggtcgacgaggcgggcaacgtg
gtcgtggcgcgcggcgaggacctgggtgacccggagatcgatgcgttgctggccgcgggg
atcacgcaggtaaaggttcgttcggtgctgacctgtaccaccggcaccggcgtgtgcgcg
acgtgttatgggcgctcgatggccactggcaagctggtcgacatcggtgaagcggtcggc
attgtggccgcccagtccatcggtgagccgggcacgcagttgaccatgcgtaccttccat
cagggtggtgtcggtgaggacatcaccggtggtctgccccgggtgcaggagctgttcgag
gcccgcgtgccgcgcggtaaggcgccgatcgccgacgtcacaggccgggtccggctggaa
gacggtgagcgtttctacaagatcaccatcgtgcccgacgacggcagcgaggaggtcgtg
tacgacaagctctccaagcggcaacggctgcgggtgttcaagcacgaggacggctcggag
cgggtgctctccgacggcgaccatgtggaggtgggccagcagttgatggaaggctccgcc
gacccgcacgaggtgctgcgggtgcagggtccccgcgaggtgcagatccacctggtccgc
gaggtccaggaggtgtatcgcgctcagggtgtgtcgatccacgacaagcacatcgaggtg
atcgtgcgccagatgctgcgccgggtcaccatcatcgactcgggctcgacggagttcctg
cccggttcgttgatcgaccgtgccgagttcgaggcggagaaccgccgggtggtggccgag
ggcggcgagcccgccgctggccgtccggtgctgatgggtatcaccaaggcgtcgctggcc
accgactcgtggctgagtgcggcgtcgttccaggagaccacgcgagtgctgaccgatgcg
gcgatcaactgccgcagcgacaagctcaacggtctgaaggagaacgtgatcatcggcaag
ctgatcccggccggtaccggtatcaaccgttaccgcaacatccaggttcagccgaccgag
gaagcccgagcggccgcgtacacgatcccgtcgtacgaggatcagtactacagcccggac
ttcggccaggccaccggagccgcggttccactggacgactacggctacagcgactaccgg
tag
DBGET
integrated database retrieval system
