Mycobacterium kansasii ATCC 12478: MKAN_21805
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Entry
MKAN_21805 CDS
T02887
Name
(GenBank) transferase
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
mkn
Mycobacterium kansasii ATCC 12478
Brite
KEGG Orthology (KO) [BR:
mkn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mkn03016
]
MKAN_21805
Enzymes [BR:
mkn01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
MKAN_21805
Transfer RNA biogenesis [BR:
mkn03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
MKAN_21805
Prokaryotic type
tRNA splicing ligases
MKAN_21805
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
DUF4514
Motif
Other DBs
NCBI-ProteinID:
AGZ52642
UniProt:
U5WUP1
LinkDB
All DBs
Position
complement(4766750..4767955)
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AA seq
401 aa
AA seq
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MPQRLGPKLLNFASEIDDNTLEQAKLTASMPFVHPHVSLMPDAHLGKGSAVGTVIPTKGA
VIPAAVGVDIGCGMVAAKTRFTEADLAARFDGEYAQELPTLRRLVEDAIPLSPGNYNKSL
QRFPFTAKKHNELLELQAELDVDLSHSPKWMQQLGSLGGGNHFIELCVDLANTVWLFLHS
GSRGVGNKIAQRHINIALQQCSGDPLTKLPNRDLAFLNEGTPEFDCYIRDLKWAQRFAYL
NRAEMMDRFIHVFASWLGVQPQRVETERINCHHNYTAPTRIDGETVWLTRKGAIDATEGK
LGVIPGSMGTRSYVVRGKGNHDSLWSAPHGAGRRFSRTKAKQLFTERDLAVAMVGIEYRH
GKEWIDEIPQAYKDIDRVMADAEPLVDIVTSLRQIMNVKGQ
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgccccaacgcctcgggccgaagctactcaactttgccagcgaaatcgacgacaacacc
ctcgagcaggcgaaactcaccgcatccatgcccttcgtccacccgcacgtctcccttatg
cccgacgcgcaccttggtaagggctcggccgtcggcaccgtcatacccaccaagggcgcc
gtgatccccgcggccgtcggagtggacatcggctgcggcatggtcgcggccaagacgcgg
ttcaccgaggccgacctggcagcccgattcgacggcgagtacgcccaagagttgcctacg
ctgcggcgcctggtcgaggacgcgataccgctgtcaccggggaactacaacaagagcttg
caacggttcccgttcaccgccaagaagcacaacgagctcctcgaactgcaggcagaactc
gatgtggacctctcccacagcccgaaatggatgcagcagttgggatctctcggcggcgga
aaccatttcatcgaactctgcgtcgacctcgcgaacaccgtctggctgttcctgcacagc
ggctcccgcggcgtgggcaacaagatcgcccaacggcacatcaacatcgccctgcagcag
tgctcgggcgatccgttgaccaagctgccaaaccgcgacctggcgttcctcaacgaggga
acacccgagttcgactgctacatcagggatttgaagtgggcgcagcgctttgcctatctc
aaccgcgcagagatgatggatcgcttcatccacgtcttcgcgtcgtggctgggtgtgcaa
ccgcaacgcgtggagaccgaacgcattaactgtcaccacaactacacggcccccacccgg
atcgatggagaaaccgtgtggctgactcgcaagggtgcgatcgacgccaccgagggcaag
ctgggagtcatcccgggatccatgggtacccgctcgtatgtcgtgcgcggcaagggaaac
cacgacagcctatggtcggccccgcacggggccggtcgccggttcagcaggaccaaggcg
aagcaactgttcaccgagcgggatctggcagtggcgatggtgggcatcgaataccgccat
ggtaaagagtggatcgacgagatcccacaggcctacaaggacatcgaccgcgtcatggcc
gatgccgaaccgctcgtcgacatcgtgacctcgctgcggcagatcatgaacgtcaaggga
cagtga
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