Mycobacterium kansasii ATCC 12478: MKAN_28025
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Entry
MKAN_28025 CDS
T02887
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mkn
Mycobacterium kansasii ATCC 12478
Pathway
mkn03030
DNA replication
mkn03410
Base excision repair
mkn03420
Nucleotide excision repair
mkn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mkn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MKAN_28025
03410 Base excision repair
MKAN_28025
03420 Nucleotide excision repair
MKAN_28025
03440 Homologous recombination
MKAN_28025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mkn03032
]
MKAN_28025
03400 DNA repair and recombination proteins [BR:
mkn03400
]
MKAN_28025
Enzymes [BR:
mkn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MKAN_28025
DNA replication proteins [BR:
mkn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MKAN_28025
DNA repair and recombination proteins [BR:
mkn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MKAN_28025
NER (nucleotide excision repair)
GGR (global genome repair) factors
MKAN_28025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
DNA_pol_lambd_f
HHH_2
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
AGZ53723
UniProt:
U5WWW4
LinkDB
All DBs
Position
6171558..6174260
Genome browser
AA seq
900 aa
AA seq
DB search
MSTASEDRAKPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEA
PTHIAAAFDVSRQTFRSERYPEYKANRSSTPDEFHGQIDITKEVLGALGITVLAEPGFEA
DDIIATLATQAEKEGYRVLVVTGDRDSLQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYG
LTPAQYPDFAALRGDPSDNLPGIPGVGEKTATKWIAEYGSLQELVDHVDSVRGKVGDALR
AHVANVVRNRELTELVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDTLAA
VEPEVDEGFDVRGGTLQPGTVAQWLAAHAGDGRRCGLTVVGTHLPHGGDTTALAIAAADG
DGGYIGTATVTPEDDAALAAWLADPAKPKALHEAKLAIHDLGGRGWTLDGVTSDTALAAY
LVRPGQRSFTLDDLSLRYLRRELRAETPEQQQLSLLDDMEGVDDQAVQTAILRARAVADL
AEALDAELARIDSTALLADMELPVQRVLADMERAGIAVDLRLLAELQSQFADQIRDAAEA
AYAVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADAVQGLFEKTGHPFLQHLL
AHRDVTRLKVTVDGLLNSVAADGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRQIR
DAFVVGAGYSELMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHSFVASRAFGVPIDEV
TGELRRRVKAMSYGLAYGLSAYGLSTQLKISTEEAKVQMDQYFARFGGVRDYLMAVVEQA
RKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIEVDKALTE
AGLASRMLLQVHDELLFEIAPGERERVEALVREKMGGAYPLDVPLEVSVGFGRSWDAAAH
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaccgccagtgaggatcgagccaagccgacgctgatgttgctggatggcaactcg
ctggcgtttcgggcgttttatgcgctgccggcggagaacttcaagacccgcggcgggctg
accaccaacgcggtctacggcttcaccgccatgctgatcaacctgctgcgtgacgaagcc
ccgacgcacatcgccgcggccttcgacgtgtcccggcagacctttcgctccgagcgttac
cccgagtacaaggccaaccgatcatcgacgcccgacgaattccacggccagatcgacatc
accaaggaggtcctgggcgcgctgggcatcacggtgctcgccgaaccgggattcgaggcc
gacgacatcatcgcgacgctggccacccaggccgagaaggagggctatcgggtcctggtc
gtcaccggcgaccgcgactcactgcagctggtcagtgacgacgtgacggtcctgtacccg
cgcaagggggtcagcgaactcacccgcttcacccccgaggccgtcgtcgagaagtacggg
ctcacccccgcgcaatacccggacttcgccgcgctgcgcggggaccccagcgacaacctg
cccggcattcccggggtgggcgagaagaccgccaccaagtggatcgccgaatacggctcg
ctgcaggagctggtcgaccatgtcgactcggttcgcggcaaagtcggcgacgcgcttcgg
gcgcacgtggccaacgtggtgcgcaaccgcgaactcaccgagctggtgcgtgatgtgccg
ctggcccaaaccccggacacgctgcggctgcagccctgggaccgcgaccacatccaccgg
ctcttcgacgacctggagttccgggtgttgcgagaccggttattcgacacgctggccgcg
gtcgagcccgaggtcgacgaggggttcgacgtgcgcggcgggacgctgcagcccggcacg
gtggcgcagtggctggccgcacacgccggcgacgggcgccgctgcggcctgacggtcgtg
ggcacccatctgccgcacggcggtgacaccaccgcgctggcaatcgcggccgccgacggc
gacggcggctacatcggtaccgccacggtgacacccgaggacgacgccgcgctggcggcc
tggttggccgacccggccaaacccaaggcactgcatgaggccaagctcgccatccatgac
ctcgggggccgcggctggaccctggacggcgtcacctccgacaccgcactggccgcctac
ctggtgcggccgggccagcgcagcttcaccctcgacgatctctcgctgcgctacctgcgc
cgcgagctgcgcgcggaaacgcctgaacagcaacaactttcattgctcgacgatatggaa
ggagtggacgaccaagccgtccaaaccgcgatcctgcgggccagggcggtggcggacctg
gccgaagcgctggacgccgaactggcccgcatcgattccacggccttgctggccgacatg
gaactgcccgtgcagcgggtgctggccgacatggagcgcgccggcatcgccgtcgacctg
cgactgctggccgagctgcaaagccagttcgccgaccagatccgcgacgccgccgaggcc
gcatacgccgtcatcggcaagcagatcaacctcggctcgcccaagcagctgcaggtcgtg
ctgttcgacgaactcgggatgccgaagaccaagcggaccaagaccggctacaccaccgac
gccgacgctgtgcagggcctttttgaaaagaccgggcacccgttcctgcagcatctgctg
gcgcaccgcgacgtcacccggctcaaggtcaccgtcgacgggctgctgaactcggtggcc
gccgacggccggattcataccacgttcaaccagaccatcgcggccacgggcaggctgtcg
tcgacggagcccaacttgcagaacatcccgatccgcaccgacgccggccggcagatccgc
gacgcgttcgtcgtcggcgccggttatagcgagctgatgaccgccgattacagccagatc
gagatgcggatcatggcgcacctgtcgggcgacgaaggtctcatcgaagccttcaatacc
ggcgaggacctgcactcgttcgtcgcgtcccgggctttcggtgtgcccatcgacgaggtg
accggcgagttgcgccgccgggtcaaggcgatgtcgtacgggctggcctacgggttgagt
gcctatgggctgtccacgcagctgaagatctccaccgaagaggcgaaggttcagatggac
caatacttcgcgcgcttcggcggcgtgcgcgactacctgatggccgtggtcgagcaggcc
cgcaaggacggatacacctcaaccgtgttggggcgccggcgctaccttcccgagctggac
agcagcaatcggcaggtgcgtgaggctgccgagcgggcggcgctcaacgcgccgatccag
ggcagtgcggccgacatcatcaaggtggcgatgatcgaggtcgacaaggcgctcaccgag
gccgggctggcgtcgcgcatgctgctgcaggtccacgacgaattgctgttcgaaatcgcg
cccggagaacgcgaacgggtcgaggcgctggtgcgcgagaaaatgggcggcgcctacccg
ttggacgttccgctggaagtgtcggtgggcttcgggcgctcttgggacgcggcggctcac
tga
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