Methylomonas koyamae: MKLM6_0093
Help
Entry
MKLM6_0093 CDS
T05118
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mko
Methylomonas koyamae
Pathway
mko03030
DNA replication
mko03410
Base excision repair
mko03420
Nucleotide excision repair
mko03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MKLM6_0093
03410 Base excision repair
MKLM6_0093
03420 Nucleotide excision repair
MKLM6_0093
03440 Homologous recombination
MKLM6_0093
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mko03032
]
MKLM6_0093
03400 DNA repair and recombination proteins [BR:
mko03400
]
MKLM6_0093
Enzymes [BR:
mko01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MKLM6_0093
DNA replication proteins [BR:
mko03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MKLM6_0093
DNA repair and recombination proteins [BR:
mko03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MKLM6_0093
NER (nucleotide excision repair)
GGR (global genome repair) factors
MKLM6_0093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
DNA_pol_lambd_f
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ATG88378
UniProt:
A0A291IDW8
LinkDB
All DBs
Position
111325..114054
Genome browser
AA seq
909 aa
AA seq
DB search
MSDSANNKLILVDGSSFLFRAFHAVPPLTNSKGEPTNAVYGVSNMLRKLINDYATPYFAV
VFDAPGKTFRHELYDQYKAHRPPMPDELRVQIQPLHDLIRALGLPLIIEHGVEADDVLGS
LAQNAARQGFNVIISTGDKDMAQLVTERIILENSMTGAVMDIAGVQEKFGVKPEQIIDYL
ALMGDAVDNIPGVPKVGPKTAAKWLQEYGTLDNLIASAAEIKGKIGDNLREALGQLPLSR
ELTTIKCDVALHYSLDDLKRKAPDIAALKDQLGSLGFSSWLKTLNGDAAVTAGEPAAPAA
APKPAPVAKDYQTILGQAEFDAWLARLEQAELFAFDTETSSLNYSEAEIVGVSFAIEAGQ
AAYLPLAHDYPGVPAQLDRQAVLQALKPLLENPDRAKLGQNLKYDAHVLANHGIALRGIR
HDTMLQSYVLNSTATKHNMDDLAKHYLGVDTIHFEDVCGKGAKQIGFAEVAIDRATEYAA
EDADITLRLHQTLSAELQQRPSLWALYNDIELPLVKVLAKIEENGVLIDSDMLAQQSQEL
ADRMIGLEIQAHDLAGSAFNLGSPKQIQEILYDRLNLPVLKKTPKGQPSTDESVLQELAV
DYALPRLILEHRGLSKLKSTYTDKLPQQINPKTGRVHTSYHQAVAATGRLSSTDPNLQNI
PIRSEDGRKIRQAFIARPGYKIVAADYSQIELRIMAHLSGDAGLLNAFAAGADIHRATAA
EVFEVAPDQVTHDLRRSAKAINFGLIYGMSAFGLAQQLGLSRNQAQSYIDLYFSRYPGVK
HYMDSTRELAKQQGYVETIFGRRLYLPDINARNAAQRQYAERTAINAPMQGSAADIIKRA
MLACHDWIETSGADLKMIMQVHDELVFEVAEPILADSIAKITGIMSAAAELAVPLLVEAG
SGANWDEAH
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattccgccaacaataaactgattctggtcgacggttcgtcctttctgtttcgc
gcctttcatgcggtaccgccattgaccaacagcaagggcgagccgaccaatgccgtttac
ggcgtttcgaatatgctgcgcaagctgatcaacgattacgccacgccctatttcgcggtc
gtgttcgacgcgccgggcaagaccttccgccacgagttgtacgaccaatacaaggcacac
cggccgccgatgccggacgagttgcgggtgcagattcaacccttgcacgacttgatccgc
gcgttgggtctgccgctgatcatcgaacacggcgtcgaagccgacgacgtgctgggcagc
ctggcccaaaacgccgcccgccagggcttcaacgtgatcatttccaccggcgacaaggac
atggcgcaattggtcaccgaacggatcattctggaaaactcgatgaccggcgcggtgatg
gacatagccggcgtgcaggaaaagttcggcgtcaagcccgaacagatcatcgattacctg
gccttgatgggcgatgcggtcgataacatccccggcgtgcccaaagtcgggccgaagacc
gccgccaagtggttgcaggaatacggcacgttggacaatctgatcgccagcgccgctgaa
atcaagggcaagatcggcgacaacctgcgcgaggccttgggccaactgccgttgtcgcgg
gaactgaccacgatcaaatgcgacgtggctttgcattacagcctggacgacctgaaacgc
aaggcccccgatatcgccgcgttgaaggaccagttgggcagtttgggttttagcagttgg
ttgaaaacgctgaacggcgacgcggcggtaaccgctggcgagccggccgcaccagccgca
gcgccgaaaccggcgccggtcgcaaaagactaccaaaccatcctcggccaagccgagttc
gacgcgtggttggcccggctggaacaagccgagttgtttgccttcgataccgaaaccagt
agcttgaactacagcgaagccgagatcgtcggcgtctcgtttgcgatcgaagccggacag
gccgcctatttgccgctggcgcacgactatcccggcgtgccggcgcaattggatcggcag
gctgttttgcaggccttgaaaccgctgctggaaaatccggaccgcgccaaactcggccaa
aacttgaaatacgacgcccacgtgctggccaatcacggcattgcactgcgcggcattcgc
cacgacaccatgctgcaatcctacgtgctgaacagcaccgcgaccaagcacaatatggac
gacctggccaaacattacctgggcgtcgacaccatccatttcgaggacgtttgcggcaag
ggcgccaagcagatcggctttgccgaagtggctatcgaccgcgctaccgaatacgccgcg
gaagacgccgacattaccttgcgcctgcaccaaaccttgtccgccgaattgcagcaacgg
cccagcttgtgggctttgtataacgacatcgaattgccgttggtcaaagtgctagccaaa
attgaggaaaacggcgtgctgatcgacagcgacatgctggcccagcaaagccaggaactg
gcggaccggatgataggcctggaaatccaggcccacgatttggccggttcggcctttaac
ctgggttcgccgaaacagattcaggaaatcctctacgaccggctgaacctgccggtgttg
aagaaaaccccgaaaggccagccctcgaccgacgagtcggtgttgcaggaactggccgtg
gattacgcgctgccgcgcttgatcctggagcaccgcggcctgagcaagttgaaatcgact
tataccgacaagttgccgcagcagatcaatcccaaaaccggccgggtgcatacctcctac
catcaggcggtggccgcgaccgggcgcttgtcgtccaccgaccccaatctgcagaacatt
ccgatccgcagcgaagacggccgcaaaatccgccaggccttcatcgcccggcccggttac
aaaatcgtcgcggccgactattcgcaaatcgaactgcggatcatggcgcatttatccggc
gacgccggcttgctgaacgcgttcgccgcaggcgccgacatccaccgcgccaccgccgcc
gaagtgttcgaagtcgcgccggaccaggtcacccacgacttgcgccgttcggccaaagcg
atcaatttcggtttgatttacggcatgtcggccttcggtttggcgcagcaactggggctg
tcgcgcaaccaggcccagtcttacatcgacctgtatttcagccggtatcccggcgtcaag
cactacatggatagcacgcgcgaattggccaagcagcaaggctacgtcgaaaccatcttc
ggccgccgcctgtatttgccggacatcaatgcccgcaacgccgcccaacgccagtatgcc
gaacgcaccgcgatcaacgcgccgatgcagggtagcgccgccgatatcatcaaacgggcg
atgttggcctgccacgactggatcgaaaccagcggtgccgatttgaaaatgatcatgcag
gtgcacgacgagctggtgttcgaagtcgcggaaccgattctcgcggacagcatcgccaaa
atcaccggtatcatgtccgccgctgccgagttggccgtgccgttgctggtggaagccggc
agcggcgccaactgggacgaggcgcattag
DBGET
integrated database retrieval system
