Methylomonas koyamae: MKLM6_0441
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Entry
MKLM6_0441 CDS
T05118
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mko
Methylomonas koyamae
Pathway
mko03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mko00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MKLM6_0441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mko03021
]
MKLM6_0441
03019 Messenger RNA biogenesis [BR:
mko03019
]
MKLM6_0441
Transcription machinery [BR:
mko03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MKLM6_0441
Messenger RNA biogenesis [BR:
mko03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MKLM6_0441
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
S1CSD-TOTE-2
Spore_III_AA
AAA_25
Mor
AAA
ResIII
Motif
Other DBs
NCBI-ProteinID:
ATG88720
UniProt:
A0A177NYE6
LinkDB
All DBs
Position
500143..501399
Genome browser
AA seq
418 aa
AA seq
DB search
MNLTELKLKQPTEIIAIAESLGLENIDRARKQELIFSILKKQAKSGEDIFGDGVLEILTD
GFGFLRTPGCSYLAGPDDIYVSPSQIRRFGLRTGDTVSGKIRPPKEGERYFAMLKVESIN
FESPEQSKNKISFSNLTPLFANKRFRLEQGNGTSEDLTARIIDLIAPIGKGQRGLIVSPP
KAGKTMIMQSIAHAIAENNPECYLIVLLIDERPEEVTEMERCVRGEVVSSTFDEPATRHV
QVADMVIEKARRMVEHKHDVVILLDSITRLARAYNMVVPSSGKLLSGGVDANALEKPKRF
FGAARNIEEGGSLTIIATALVETGSRMDEVIFEEFKGTGNMELHLERKIAEKRVYPAINI
NRSGTRREEYLVDPDELQKTWILRKILQPMDELAASEFLLGKLKDFKTNAEFFDSMKR
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttaccgagttaaaacttaaacaaccgacagaaatcatcgctatcgccgaatcc
ctggggctggaaaacatcgacagagcccgaaagcaggaactgattttctcgattttgaaa
aagcaggcgaaaagcggagaagacatattcggcgatggggtgctggaaattttgactgac
ggtttcggctttctgcgcacgccgggttgttcttacttggctggaccggacgacatatac
gtatcgcccagccagattcggcgtttcggcctgcgcaccggcgataccgtcagcggcaag
attcggccgccgaaagagggtgagcgttactttgcgatgctgaaggtggaaagcatcaac
ttcgaatcccccgagcaatccaaaaacaagatttccttttccaacctgacgccgttattc
gccaacaagcgcttccgcctggagcagggcaacggtaccagcgaagacttgaccgcccgc
atcatcgatttgatcgcaccgatcggtaaaggccagcgcggcctgatcgtgtcgccgccg
aaagccggtaaaaccatgatcatgcaaagcattgcccacgccatcgccgagaataaccct
gaatgctacctgatcgtgctgttgatcgacgagcgtccggaagaggtgaccgagatggag
cgttgcgtgcgcggcgaagtggtgtccagcaccttcgacgaaccggccacccgccacgtg
caggtcgccgacatggtgatcgaaaaagcccggcgcatggtagagcacaagcacgacgtg
gttattctgttagactcgattacgcgtttggcccgcgcttataacatggtggtgccgtcc
tccggcaagctgctgtccggcggtgtcgacgccaatgccctggaaaaaccgaaacgtttt
ttcggtgcggcgcgcaatatcgaagaaggcggcagtttgacgattatcgctaccgcgctg
gtagaaaccggctcgcggatggacgaggtcattttcgaggagtttaagggcaccggtaac
atggagttgcatctggagcggaaaattgccgaaaagcgggtctatccggccatcaacatc
aaccgttccggcacccgccgcgaagaatatctggtcgatccggacgagctgcaaaaaacc
tggatcttgcgcaagattctgcaaccgatggacgaattggcggcatccgaatttttgctg
ggcaaactgaaggacttcaaaaccaacgccgaatttttcgattcgatgaagcgttaa
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