Methylomonas koyamae: MKLM6_0893
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Entry
MKLM6_0893 CDS
T05118
Name
(GenBank) pseudouridine synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mko
Methylomonas koyamae
Brite
KEGG Orthology (KO) [BR:
mko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mko03016
]
MKLM6_0893
Enzymes [BR:
mko01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
MKLM6_0893
Transfer RNA biogenesis [BR:
mko03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MKLM6_0893
Prokaryotic type
MKLM6_0893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Erythro-docking
Motif
Other DBs
NCBI-ProteinID:
ATG89161
UniProt:
A0A291IG53
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All DBs
Position
965438..966490
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AA seq
350 aa
AA seq
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MTPNPEFVGFDLTGWPHAYGGPSGTGNIKTVPDDFIVEEILGFEPEGSGEHVFLFVEKIG
ENTEYVARLLARHAGVRQRDIGYAGLKDRHGRTRQWFSVWLPGKDDPDWSAVESESLKVL
QVVRHPRKLKRGVLAGNRFEILLRNWQGDRAQAESQLRQIQTRGFPNYFGPQRFGHQGRN
IDKAVALFGGAKLKREQASIYLSAARSYLFNLILAERVSQGNWDQALAGDIFKLAASNSL
FAGAAADAGLAARVAAGEIHPTGVLYGKAGLFAEADAGQIEQAVLNANPLLVEGLRVHAD
AADRRALRAMPGELGWEWEHAGLRLGFSLPAGSYATALLRELIGDESAAA
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
ttgacgccaaatccggaatttgttggttttgatttaactggctggccccacgcctacggc
ggcccatccggcactggcaacatcaaaaccgtccccgacgacttcatcgtcgaagaaatc
ctcggcttcgagccggaaggcagcggcgagcacgtgtttttgttcgtcgaaaaaatcggc
gaaaacaccgaatacgtcgcccgcttgctggcccgccacgccggcgttaggcagcgcgac
atcggctacgccggcctgaaagaccgccatggccgcacacggcaatggttcagcgtttgg
ctgccgggaaaggacgatcccgattggtctgctgttgaatcagaaagcctgaaagtcctg
caagtcgtccgccatccgcgcaaactcaagcgcggcgtgctggccggcaaccggttcgaa
attctgcttcgcaactggcaaggcgaccgcgcgcaagccgaaagccaactccggcaaatc
caaactcgaggctttcccaattacttcggcccgcaacgcttcggccaccaaggccgaaat
atcgacaaagccgtggcgctgttcggcggcgctaaactcaagcgcgaacaggcatcgatt
tacctgtccgccgcccgctcctatttgttcaatctgatcttggccgagcgcgtcagccaa
ggcaattgggatcaagctttggccggcgatattttcaaactggcggcgagcaacagcctg
tttgccggcgcagcggccgatgccggcctggcagcgcgagtggcagccggcgagattcat
cctaccggcgtgctgtacggtaaagccggcctgtttgccgaggccgacgccggacagatc
gagcaagcggtgttaaacgcgaatccgttattggtcgagggcttgcgagtccatgccgat
gccgccgaccgccgtgcgctaagggcgatgccgggcgaactgggttgggagtgggaacac
gcaggcctgcgcttaggtttttcgttgccggccggcagttacgcgacagccttgctgagg
gagttgatcggcgacgaatcggccgctgcgtag
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