Methylomonas koyamae: MKLM6_1407
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Entry
MKLM6_1407 CDS
T05118
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
mko
Methylomonas koyamae
Pathway
mko03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mko00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
MKLM6_1407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mko03019
]
MKLM6_1407
03009 Ribosome biogenesis [BR:
mko03009
]
MKLM6_1407
03036 Chromosome and associated proteins [BR:
mko03036
]
MKLM6_1407
Enzymes [BR:
mko01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
MKLM6_1407
Messenger RNA biogenesis [BR:
mko03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MKLM6_1407
Ribosome biogenesis [BR:
mko03009
]
Eukaryotic type
90S particles
RNase
MKLM6_1407
Prokaryotic type
rRNA processing factors
MKLM6_1407
Chromosome and associated proteins [BR:
mko03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
MKLM6_1407
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
RM44_endonuclase
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
ATG89658
UniProt:
A0A291IHH7
LinkDB
All DBs
Position
1523452..1524135
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AA seq
227 aa
AA seq
DB search
MIKKPEILSVKLGLAFNDPQLFSMALTHRSVGARNNERLEYLGDSVLGFVIAEQLYELFP
DAGEGVLSRLRASLVNQSSLAELARQHNLGDYLILGSGELKSGGFRRDSILSDALEAIMG
ALLRDQGIDVCRQWILRLFADKFADLKVDDWNKDPKTRLQELMQANRKPLPVYELVGMSG
ADHAQTFEVKCSVVVTSETCNGVGISRKKAEQAAAENMLNLLQTKAK
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
gtgattaaaaaacccgaaatcctctctgtaaaactggggttggcgtttaacgatccgcag
ttgttcagcatggcgttgactcaccgcagtgtcggtgcccgcaataacgagcgtttggaa
tatctgggcgattcggtgctcggcttcgtcattgccgagcaattgtacgagttgtttccc
gatgccggcgaaggcgtactgagccggttgcgggccagtctggtcaatcaaagttcgctg
gccgaattggccaggcagcacaatctcggcgattatctgattctcggttccggcgagttg
aagagcggcggattccgccgcgattcgattttgtcggatgcgctggaagccatcatgggt
gcgttgctcagagaccagggtatcgacgtttgccgacaatggatactgcgcctgtttgcc
gataaattcgccgatttgaaagtcgacgattggaacaaggatccgaaaacccggctgcag
gaattgatgcaggccaaccgcaagcctttgccggtttacgaattggtcggcatgtccggc
gccgaccatgcccagactttcgaggtcaaatgtagcgtcgtggtcaccagcgaaacctgt
aacggcgtcggcatctcaaggaaaaaggccgaacaggccgctgcggaaaatatgttgaac
cttttacaaaccaaggctaaatga
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