Methylomonas koyamae: MKLM6_2328
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Entry
MKLM6_2328 CDS
T05118
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
mko
Methylomonas koyamae
Brite
KEGG Orthology (KO) [BR:
mko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mko03400
]
MKLM6_2328
Enzymes [BR:
mko01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
MKLM6_2328
DNA repair and recombination proteins [BR:
mko03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
MKLM6_2328
Prokaryotic type
MKLM6_2328
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ATG90551
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All DBs
Position
2618898..2620283
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AA seq
461 aa
AA seq
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MSKPRYRTSLFIFRRDLRLADNTALNAALKSSQRVLACFVFDPRQIEAHPYRSQPALQFM
LESLNDLQTQCLAHGGRLYLFGERPEAVVEHLHRQQSIEAVFVNRDYTPFSRQRDRELEL
CCEKLGIGFHSHADLLLNEPERVLTDKGSPYQVFTAFYKKAVQNPVAVPDAVAGDRWFNA
AVDADRPELLQNLIRPRQNALAGGRQAALQHLAALAACRDYSQTRDFPELDATSHLSPYL
KFGCCSVREAYQAIQVQLGPDHALLRQLYWRDFFSHIAYHFPHVFGHAFDRRLDGLRWRN
AQDDFWAWANGQTGFPIVDAAMRELNQTGWMHNRLRMVVASFLVKDLHVSWRWGERYFAQ
HLLDYDPCVNNGNWQWAASTGCDAQPYFRIFNPWLQQKKFDPDCRYIKTWLPELRRYSAA
AIHKWEKSPLAGDYPPPRVNHAEQSRSIKTQYQTLLSNQPT
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaccgcgttatcgaacttccttatttattttccgccgcgacctgcgcctggca
gacaacaccgcattgaacgcggcattgaaaagctcgcagcgggtgttggcctgcttcgtt
ttcgatccgcgccagatcgaggcccacccctaccgaagccaaccggcgctgcaattcatg
ctggaatcgttaaacgatttgcaaacccagtgtctggcgcacggcggccggctctatctg
ttcggcgagcggccggaagcagttgtcgaacatctacaccggcagcaaagtatcgaagcg
gtattcgtcaatcgggattacacgccgtttagccgccagcgcgaccgggaactggagtta
tgttgcgaaaaattgggcatcggcttccatagccatgccgacctgttgctaaacgagccg
gaacgggtattgaccgacaaaggctcgccctaccaagtgtttaccgccttttacaaaaaa
gcggtgcaaaatccggtagccgtcccggatgcagtagccggcgaccgctggttcaatgct
gccgtcgacgccgaccggccggaactgctgcaaaatttgatccggccgcgacagaatgcc
ctggccggcggccggcaagccgcattgcaacacttagcggcattggcggcatgccgggat
tacagccagacccgcgactttccggaactcgacgccaccagccatttgtcgccgtatctt
aagtttggctgctgctcggtacgcgaagcctaccaagccatccaagttcaacttgggccc
gaccatgcgctgttgcggcaattgtactggcgcgattttttcagccatatcgcctaccat
tttccgcacgtattcggccatgccttcgaccgccgtctggacgggctgcgctggcgcaat
gcccaagacgatttctgggcctgggccaacggccaaaccggatttcccatcgtcgatgcg
gcgatgcgggaactgaaccagaccggctggatgcacaaccggctgcgcatggtcgtcgcc
tcgttcctggttaaagacctgcatgtgtcctggcgctggggcgaacgttacttcgcccag
catctgctcgattacgatccttgcgtcaacaacggcaactggcaatgggcggcgtcgacc
ggctgcgacgcgcaaccgtatttccggattttcaacccgtggctgcaacagaaaaaattc
gatcccgactgccgctacatcaaaacctggctgccggaactgaggcgctattcggccgca
gcgatccacaaatgggaaaagtcgccgctggccggcgattatccgccgccgcgggtgaat
catgccgagcaaagccgcagcatcaaaacccaataccaaaccttattgtccaaccaaccg
acctga
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