Methylomonas koyamae: MKLM6_2914
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Entry
MKLM6_2914 CDS
T05118
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mko
Methylomonas koyamae
Pathway
mko03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mko00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MKLM6_2914
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mko03019
]
MKLM6_2914
Enzymes [BR:
mko01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MKLM6_2914
Messenger RNA biogenesis [BR:
mko03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MKLM6_2914
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_25
AAA_19
UvrD-helicase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ATG91117
UniProt:
A0A291ILR0
LinkDB
All DBs
Position
complement(3310554..3311858)
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AA seq
434 aa
AA seq
DB search
MLFSELGLSEQLLRAVAEQGYQTPTPIQAQAIPVILQGRDVLAGAQTGTGKTAGFTLPLL
HILQQQPIPQKPRPVRVLVLTPTRELAMQVYESVRTYGKHLPLFAEAIFGGVSINPQIQK
IRRGTDIVVATPGRLLDLIQQQHLDLSHVEHFVLDEADRMLDMGFIRDIRKIIALLPEKR
QNLLFSATYAPEIGALAEQLLNDPVEIAVAKRNAAADTVSQLVYGIQREYKRELLAYLIG
DGHWQQVLVFVRTKHGADRLCKQLIKDGIRCAALHGDKSQGARVRALDEFKNGAITALIA
TDIAARGLDIDQLPHVVNFDLPQVAEDYVHRIGRTGRAGAEGQAISLVDPEEAHLLAAIE
KLLKRQIPRVADTGYPRVSLEPGNGKPPAKPIAPRPKPQQTGRRAQPSGGKSDPGKRTPP
RKPRRGNVNAAKPR
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgttattttcagaactgggtttgtccgaacaattgttgcgggcggttgccgaacaaggt
tatcaaacgccgacgcctattcaggcgcaggcgattccggtgattctgcagggtcgagac
gttttggccggtgcgcagaccggtaccggcaagaccgcgggcttcaccttgccgttgttg
cacatcctgcagcaacagccgattccgcaaaaaccgcggccggtcagggtgttggtgttg
acgccgacccgcgagctggcgatgcaggtctacgaaagcgtcagaacttacggcaagcat
ctgccgctgtttgccgaggcgattttcggcggcgtcagtatcaatccgcagattcagaaa
atccgccgcggtaccgatatcgtcgtcgccacgccgggtcgattgctggatttgattcag
caacagcacctggatttgtcccacgtcgagcattttgtgctggacgaggccgaccggatg
ctggatatgggcttcatccgcgatattcgcaaaatcatcgcgctgttgccggaaaaacgg
caaaacctgctgttttccgcgacttacgcgccggaaatcggtgcgttggccgagcaattg
ctgaacgatccggtcgagatcgccgtggctaaacgcaatgccgccgcggataccgtctcg
caattggtttacggcattcagcgcgaatacaaacgcgagctgttggcgtatttgatcggc
gacggccattggcagcaagtactggtatttgtgcggaccaaacacggcgcggaccgcttg
tgtaagcaattgatcaaagacggcatccgttgcgcggccttgcacggcgataagagccag
ggcgccagggtccgggctttggacgaatttaaaaatggtgcgattaccgcgttgatcgcg
accgatattgccgcgcgcgggctggatatcgaccaattgccgcatgtcgtcaatttcgac
ttgccgcaggtcgccgaagattacgtgcaccgcatcggccgcaccggccgggccggcgcg
gaagggcaggccatttcgttggtcgacccggaagaggcgcatttgttggcggcaatcgaa
aaattgttgaaacggcaaattccgcgcgtcgccgataccggttaccctcgggtatcgttg
gagcccggcaacggcaagccgccggcaaagccgatagcgccgcggcccaaaccgcagcaa
accgggcgccgcgcccaaccaagcggcggcaagtccgatcccggcaaacgcaccccgccg
cgcaaaccgcgccgcggcaacgtaaacgccgctaaaccccgttag
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