Methylomonas koyamae: MKLM6_2994
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Entry
MKLM6_2994 CDS
T05118
Name
(GenBank) nif-specific transcriptional activator NifA
KO
K02584
Nif-specific regulatory protein
Organism
mko
Methylomonas koyamae
Pathway
mko02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
mko00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MKLM6_2994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mko03000
]
MKLM6_2994
Transcription factors [BR:
mko03000
]
Prokaryotic type
Helix-turn-helix
Other families
MKLM6_2994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
GAF_2
AAA_5
AAA
Mg_chelatase
AAA_2
GAF_3
bpMoxR
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ATG91197
UniProt:
A0A291IM09
LinkDB
All DBs
Position
3396736..3398262
Genome browser
AA seq
508 aa
AA seq
DB search
MSERLLLVESELDTLYMVSQLLNSTHELRSKLKGILEILHKRSGLRFGMITLRDIEDDSM
GICEIYGEGIDRSVRYQPGEGLVGAILDEGSTIVVERIADEPRFLSRLGVYDPDLPFIGS
PLAVEQGEVVGILAAQPCDASFLGERARFMEMVANLIAHSVNMLRVMERKQNELVNERDY
LKQTLVKNYRFENIIGHSEPMLKVFDIIRQVAKWHTTVLIRGESGTGKEVVASSIHFNSA
CANGPFLKLNCAALPDTLLESELFGHEKGAFSGAIGQRKGRFELADGGTLFLDEIGEISA
SFQAKLLRVLQEGEFERVGGVRTLKVNVRIIAATNRNLEQEVADGNFREDLYYRLNVMPI
NMPPLRERIEDIPELSAFLLNRISKQQGGRTLEIKESAIRILMKHDWPGNVRELENRLER
AAIMSADGIIDRDVIASTGLENEIGISRTPQSIKHIDLHDESMDERERVIAALEQSGWVQ
AKAARLLDMTPRQIAYRIQTLNINVKQI
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaacgattattactggtcgagtcggagctggatacgctctacatggtcagccag
ttgctgaacagcacccatgagttacgcagcaaactgaaaggcattctggagattttgcat
aaacgcagcggcctgcgcttcggcatgatcaccctgcgcgacatcgaagacgacagcatg
ggcatctgcgagatttacggcgaaggcatcgaccgctcggtacgttaccagcccggcgaa
ggcctggtcggggcgattctcgacgaaggcagcacgattgtggtcgaacgcatcgccgac
gagcctcgtttcttaagccgcctgggcgtttacgaccccgacctgccgttcatcggctcg
ccactggcagtggaacaaggcgaagtggtcgggattctggcggcgcaaccctgcgacgcc
agctttctgggggaacgcgcccgcttcatggaaatggtcgccaacctgatcgcgcacagc
gtcaacatgctgcgggtcatggagcgcaagcaaaacgaactggtaaacgaacgcgattat
ttgaagcaaaccctggtcaaaaactatcgcttcgaaaacatcatcggccactccgaaccg
atgctgaaagtgttcgacatcattcgccaggtagcgaaatggcacaccacggtgttgatc
cgcggcgaatccggcaccggtaaggaagtcgtcgccagctcgatccatttcaattcggcc
tgcgccaacggcccgtttttgaaactgaactgcgcggcactgccggataccttgctggaa
tcggaattgttcggccacgaaaaaggcgcgtttagcggcgcgatcggccagcgcaagggc
cgcttcgaattggccgacggcggtacgctgtttctggacgaaatcggcgaaatctcggca
tcgttccaagccaagttgctgcgggtgctgcaggaaggcgaattcgaacgggtcggcggt
gtgcgcacgctgaaagtcaacgtccgcatcatcgccgcgaccaaccgcaatctggagcag
gaagtggccgacggcaatttccgcgaggatttgtattaccggctcaacgtcatgccgatc
aatatgccgccgttgcgggagcgaattgaagatattccggaactgtcggcgtttttattg
aaccggatttccaaacaacaaggcggccggacgctggaaatcaaggaaagcgctatccgc
atcctgatgaaacacgactggcccggcaacgtgcgcgaactggaaaaccggctggaacgc
gccgcgatcatgagcgccgacggcatcatcgaccgcgacgtgatcgccagcaccggcctg
gaaaacgaaatcggcatcagccgcacgccgcaatcgatcaagcatatcgacctgcacgac
gagagcatggacgaacgcgaacgagtcatcgccgcgctggaacaaagcggctgggtgcaa
gccaaggccgcccgcctgttggacatgacgccgcggcaaatcgcttaccggatccagacg
ttgaacattaacgttaaacaaatctga
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