Methylomonas koyamae: MKLM6_3067
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Entry
MKLM6_3067 CDS
T05118
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
mko
Methylomonas koyamae
Pathway
mko00550
Peptidoglycan biosynthesis
mko01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mko00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MKLM6_3067
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mko01002
]
MKLM6_3067
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mko01011
]
MKLM6_3067
Enzymes [BR:
mko01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
MKLM6_3067
Peptidases and inhibitors [BR:
mko01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
MKLM6_3067
Peptidoglycan biosynthesis and degradation proteins [BR:
mko01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
MKLM6_3067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
Peptidase_S13
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
ATG91266
LinkDB
All DBs
Position
3481791..3482936
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AA seq
381 aa
AA seq
DB search
MTFGLFGGLLLLFTSLSLHAAGPIFTPAAPSVAASSFFLLDFNSSRILAEKDADKRVAPA
SLTKIMTAYVVFRELKAGHLTLDEKVTISQNAWETGGSKMFVEVNKQVRVEDLLQGMIIQ
SGNDASVALAEHVAGSEQTFATMMNEQASRLGMANSHFENATGLPSPNHYSSARDLALLA
QAMIREFPEYYRWDSQKEFTYNGITQQNRNLLLWRDPSVDGLKTGFTDDAGYCMVASAKR
EDMRLISVVMGTASANARSNESQSLLNYGFRFFETHRLYEGGKPLAETRIRKGVTSKLAV
GLAEDLYVTAPRKHFNELKAETQIDKGVFAPLNKGDTVGSLNVTLAGDAIASKPLVALDS
VAEGGLFRRLYDAAIGLLEKE
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgacattcggcctgtttggcgggctgctgttactgttcaccagcctgtctttgcacgcc
gccggaccgattttcaccccggccgcccccagcgtcgccgcctccagtttcttcctgctg
gatttcaacagcagccggattctggccgagaaagacgccgacaaacgcgtcgctcccgcc
agtctgaccaaaatcatgacggcttacgtcgtgttccgcgaattgaaggccggacattta
acattggacgagaaagtcacgatcagccagaacgcctgggaaaccggcggctcgaaaatg
ttcgtcgaggtcaacaaacaagttcgtgtcgaagacttgctgcaaggcatgatcatccaa
tccggtaacgacgccagcgtggccttggccgaacacgtcgcaggcagcgagcaaaccttc
gcgacgatgatgaacgaacaagccagccgcctgggcatggccaacagccatttcgaaaac
gccaccggcctgcccagccccaaccattacagctcggcgcgggatctggcgctgctggcg
caagcgatgatccgcgagtttccggaatactaccgctgggattcgcaaaaagaattcacc
tacaacggcatcacccaacaaaaccgtaacctgctgttatggcgcgatccgtcggtcgac
ggcttgaaaaccggctttaccgacgacgccggctactgcatggtcgcttcggccaaacgc
gaagacatgcgcctgatctcggtcgtgatgggcaccgccagcgccaatgcccgttccaac
gaaagccagtcgttgctgaattacggcttccgcttcttcgaaacccaccgcctgtacgag
ggcggcaagccgttggccgaaacccgcatccgcaagggcgtgacttccaaattggcggtc
ggcttggcggaagacctttacgtgaccgcgccgcgcaaacatttcaacgaactgaaagcc
gaaacccagatcgacaaaggcgtattcgccccgcttaacaaaggcgacacggtgggcagt
ttgaatgtcacgctggccggcgatgcgatcgccagcaaaccgctggtggcattggatagt
gtggccgaaggcggcctattccgccgcctgtacgacgccgcgatcggcttactggagaaa
gaatga
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