Methylomonas koyamae: MKLM6_3249
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Entry
MKLM6_3249 CDS
T05118
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
mko
Methylomonas koyamae
Pathway
mko03030
DNA replication
mko03430
Mismatch repair
mko03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MKLM6_3249
03430 Mismatch repair
MKLM6_3249
03440 Homologous recombination
MKLM6_3249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mko03032
]
MKLM6_3249
03400 DNA repair and recombination proteins [BR:
mko03400
]
MKLM6_3249
Enzymes [BR:
mko01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MKLM6_3249
DNA replication proteins [BR:
mko03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MKLM6_3249
DNA repair and recombination proteins [BR:
mko03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MKLM6_3249
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
HP_1247_M
DNA_pol3_gamma3
Hda_lid
DUF6830
DNA_pol_B_thumb
Motif
Other DBs
NCBI-ProteinID:
ATG91441
UniProt:
A0A291IMK1
LinkDB
All DBs
Position
complement(3675792..3676805)
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AA seq
337 aa
AA seq
DB search
MRLKVEQLATALQKAVAPVYLVSGDEPLQLGEAADDIRKAARAAGYTTREVISVESGHEW
PQLGLEADSLSIFSDKKLIDLRLPSAKPGTEGSKALIAYCQRLPEDTVLLVTAGKLESAA
QKSQWFQAVDGVGVIVQVWPLQGQELRQWLQRRAERKGMRLDHDALKSLAARVEGNLLAA
AQEIEKLYILHGATLVGKAMVEDDVADSARFDVFKLTEALLAGKLNRALKILNGLRAEGT
ASSIVLWALSRETRMLLHVKSELGRGANPDAVFKKYQVWDKRKHLVQEAVQRLKTEQLQA
ILRAGAEIDRSIKGQSAGDEWEGLFGLCLRFSGMAGL
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcttgaaagtcgagcagttggctacggcgttgcaaaaagccgtggctcctgtctat
ctggtcagcggcgacgagcctttgcagttgggcgaagccgccgacgacatccgtaaggcg
gcgcgagcggccggctacaccacccgcgaagtaatttcggtcgagtccggccacgaatgg
ccgcaacttggcctggaagccgattcgctgtcgattttttccgacaaaaaattaatcgat
ttgcgcctgccttcggcgaagccgggaacggaaggcagcaaagctctgatcgcctattgc
cagcgtttaccggaagataccgtgttgctggtgacggcgggcaaactagagtcagcggcg
caaaagtcgcagtggtttcaggcggtggacggcgttggcgtcatcgtccaggtttggcca
ttgcaagggcaggaattgcggcagtggttgcaacgccgcgccgagcgcaaaggcatgcgg
ctggaccacgatgccttgaaaagtttggcggcccgggtcgagggcaatctgttggcggcc
gcacaggagatcgaaaagctttatatcctgcacggtgcgaccttggtcggcaaagccatg
gtcgaggatgacgttgccgatagcgcccgtttcgacgtgttcaagttgaccgaggccttg
ctggccggaaaattgaaccgggcgttaaaaatactgaatggcttacgggccgaaggaacc
gccagttccatcgtgttgtgggcgctgagtcgggaaaccaggatgttgctgcacgtcaaa
agcgagttaggccgcggcgccaacccggacgcggtgtttaagaaatatcaggtttgggat
aaacgcaagcatctggtccaggaagcggtccagcgtttgaaaaccgagcagttgcaagcg
attctgcgggccggcgcggaaatcgaccgcagcataaaggggcaatccgccggggacgag
tgggaaggtttgttcggtttgtgtttgcggttttcgggaatggcggggctgtga
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