Methylomonas koyamae: MKLM6_3320
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Entry
MKLM6_3320 CDS
T05118
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mko
Methylomonas koyamae
Brite
KEGG Orthology (KO) [BR:
mko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mko03032
]
MKLM6_3320
03400 DNA repair and recombination proteins [BR:
mko03400
]
MKLM6_3320
Enzymes [BR:
mko01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MKLM6_3320
DNA replication proteins [BR:
mko03032
]
Prokaryotic type
DNA Topoisomerases
MKLM6_3320
DNA repair and recombination proteins [BR:
mko03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MKLM6_3320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
DNA_ligase_ZBD
Motif
Other DBs
NCBI-ProteinID:
ATG91510
UniProt:
A0A291IMU9
LinkDB
All DBs
Position
complement(3755255..3757570)
Genome browser
AA seq
771 aa
AA seq
DB search
MSKSLVIVESPAKCKTIEKYLGKDFQVLASYGHVRDLIPKEGAVDPDNGFAMKYQVIDRN
QRHLQEIGKAIKNVDTLYLATDPDREGEAISWHVFEHLKEKKLLKDKEVRRVVFHEITKK
AVTEAIAHPTELSNSLVNAQQARRALDYLVGFNLSPLLWKKIRRGLSAGRVQSPALRMIV
EREMEIEAFKTREYWSHTAEANAQGQAFKAKLTHFNGEKLNQFSFTDEAQAHQVRQTLLD
AADGELIVAKLEKKQRSRHPAPPFITSTLQQEAARKLGFTTKRTMMVAQQLYEGIDLGGE
TVGLISYMRTDSVNLAEEAIADIRGLIAEKYGAENVPKEPRQFKTKSKNAQEAHEAIRPT
SVQRLPDQVKGRLTVEQFKLYDLIWKRTVACQMIHATLNQVAVDLNCGSDRNVFRATGST
VTNPGFMMVYLEGVDDSKEAADDQESILPPMEQGRPVKLQEIVATQHFTEPPPRYSEASL
VKALEEYGIGRPSTYAAIISTLQNREYVTIENKRFYPTDVGRIVNKFLTEHFTKYVDYSF
TANLEDELDAVSRGEKDWIPLMNDFWRPFTQLINEKEESVQRKDVTQESIDEKCPECGSA
LSIRLGRNGRFIGCTNYPTCSYTRNLGEDNAVAAGEPEVVEGRVCPKCESALVIKTGRYG
KFVGCSAYPKCKHIEPLEKPQDTGVECPQCKKGAILKRKARSGKIFYSCSEYPKCDYALW
DAPIKEECPDCHWPILTLKTTKRRGTEKVCPQKECKYATPYEGDAEDANGP
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaagtttagtcattgtagagtcgcctgcaaaatgcaaaaccatcgaaaaatac
ctgggtaaagatttccaggtgcttgcctcctacggccatgtgcgcgatttgatacccaag
gaaggcgctgtcgatcccgacaacggcttcgccatgaaatatcaagtgatcgaccgcaat
cagcgccatttgcaggaaatcggtaaggcgatcaaaaacgtcgatacgttgtatctggcg
accgacccggatcgagaaggcgaggcgatttcctggcacgtgttcgagcatttaaaagaa
aaaaaattgctgaaagacaaggaagtacggcgggtggtgtttcacgaaatcaccaaaaag
gccgtaaccgaagccatcgcccacccgaccgagttgtccaacagcttggtcaacgcccag
caggcgcggcgagccttggattatttggtgggtttcaatctgtcgccgttgttgtggaag
aagatccgccgcggattgtccgccggccgggtgcagagtcccgcgctgcggatgatcgtc
gaacgcgagatggagatcgaagcgttcaagacccgggaatactggtcgcataccgccgag
gccaacgcccaagggcaagcgttcaaagccaaattgacccatttcaacggcgagaaactc
aaccaattcagttttaccgacgaggcgcaagcgcatcaggtgcggcaaacgttgttggat
gcggccgacggcgaattgattgtcgccaaactggaaaagaagcagcgcagcagacatccg
gcgccgccgtttatcacttcgacattgcaacaggaagccgcgcggaagctgggttttacc
accaagcgcacgatgatggtcgcccagcaattgtacgagggcatcgatcttggcggcgaa
acggtgggtttgatttcctatatgcgtactgactcggtgaatctggccgaggaggctatc
gccgatattcgcggtctgatcgccgaaaaatacggcgccgaaaatgtgccgaaagagccg
cgccagttcaaaaccaaatccaaaaacgcgcaagaggcgcacgaggcgatacggccgact
tcggtgcagcgcttgccggatcaggtcaaaggtcggctgacggtcgaacagttcaagctc
tacgatctgatctggaagcgtaccgtggcctgccagatgattcatgccacgttgaaccag
gttgccgtggatttgaactgcggcagcgaccgaaatgtgttccgcgctaccggttccacg
gtgaccaatcccggtttcatgatggtttatttggagggggtcgacgacagcaaggaggcc
gccgacgaccaggaaagcattctgccgccgatggaacaagggcggccggtcaaattgcaa
gagatcgtcgccacccagcacttcactgagccgccgccgcgctacagcgaggccagtctg
gtcaaggcgttggaggaatacggtataggtcggccttcgacctatgccgccatcatttcc
acgctgcaaaaccgcgaatacgtaacgatagaaaacaagcgtttctatccgaccgacgtc
ggtcggatcgttaacaagtttctgaccgagcatttcaccaaatacgtcgactacagtttc
accgccaatctggaagacgagctggatgccgtgtcgcgcggcgaaaaggattggattccg
ttgatgaacgacttttggcggccgtttacccagttgatcaacgagaaagaagagagcgtg
cagcgcaaggatgtgacgcaggagagtatcgacgagaaatgcccggaatgcggcagcgcc
ttgtcgattcggttgggccggaacggccgcttcatcggttgtaccaattacccgacctgc
tcgtacacccgtaatctgggcgaagacaatgccgtggcggccggcgaaccggaagtggtt
gaaggccgggtttgcccgaagtgcgaatcggctttggtgatcaagaccggacgttacggc
aagttcgtcggctgtagcgcttatccgaaatgcaagcacatcgagccgttggaaaaaccg
caggacaccggtgtcgaatgtccgcaatgcaagaaaggcgcgattttgaagcgcaaggcg
cgtagcggcaagattttctattcctgttcggaataccccaaatgcgattatgcgttatgg
gatgcgccgatcaaggaagaatgccccgattgccactggccgattttaaccttgaaaacc
accaagcgccgcggcaccgaaaaagtctgtccgcagaaggaatgcaaatatgcaacccct
tacgaaggcgatgccgaggatgctaacgggccttaa
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