Methylomonas koyamae: MKLM6_4160
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Entry
MKLM6_4160 CDS
T05118
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mko
Methylomonas koyamae
Pathway
mko03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MKLM6_4160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mko03400
]
MKLM6_4160
Enzymes [BR:
mko01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
MKLM6_4160
DNA repair and recombination proteins [BR:
mko03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MKLM6_4160
Prokaryotic type
MKLM6_4160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ATG92330
UniProt:
A0A291IQ18
LinkDB
All DBs
Position
complement(4707690..4708238)
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AA seq
182 aa
AA seq
DB search
MVGPVVCCQPVLSKVMLIGQAPGGKEGQFGKPFAWTAGKTLFGWFGRLGLSEEQVRQRLY
MAAVCRCFPGKQAGGGDRVPSPAEIDHCAAWLRAEIELLQPQLILPVGKLAIRQWLRADK
LDQVIGRQFRVEAYGHAADLIPLPHPSGASTWHRTEPGIGLLAEALAAIERHPAWQAIRP
ND
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggtcgggccggtggtctgttgccagccggtgttgtcgaaggtgatgctgatcggccag
gcgccgggcggcaaggaaggccagttcggcaaaccgttcgcctggaccgccggcaaaacc
ttattcggctggttcggccggttgggactaagcgaagagcaggtccggcaacggctgtac
atggcggcggtgtgccgttgcttccccggcaaacaagccggcggcggcgaccgggtgccg
agcccggccgaaatcgaccattgtgcggcgtggctgcgggccgaaatcgagctattgcaa
ccgcaattgatacttccggtcggcaaactggcgatccggcaatggctgcgggccgacaag
ctcgaccaggtgatcggccggcaatttcgggtcgaggcctacggccacgccgccgacctg
atcccgctgccgcacccgtccggcgcctcgacctggcaccggaccgagccgggcatcggt
ttgctggccgaggccctggcggcgatcgagcgccatccggcctggcaagctatccggcca
aacgattga
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