Mycolicibacillus koreensis: MKOR_05340
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Entry
MKOR_05340 CDS
T06447
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mkr
Mycolicibacillus koreensis
Pathway
mkr03030
DNA replication
mkr03430
Mismatch repair
mkr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mkr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MKOR_05340
03430 Mismatch repair
MKOR_05340
03440 Homologous recombination
MKOR_05340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mkr03032
]
MKOR_05340
03400 DNA repair and recombination proteins [BR:
mkr03400
]
MKOR_05340
Enzymes [BR:
mkr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MKOR_05340
DNA replication proteins [BR:
mkr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MKOR_05340
DNA repair and recombination proteins [BR:
mkr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MKOR_05340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
UVR
DEDDh_C
DUF7508
Motif
Other DBs
NCBI-ProteinID:
BBY53283
LinkDB
All DBs
Position
complement(597829..599817)
Genome browser
AA seq
662 aa
AA seq
DB search
MGADDAEQLSLPGVGTPGTLGAVSAAEALDEQPLAATTFVVVDLETTGGAGSDAITEVGA
VKVRGGRVLGEFATLVDPRRGIPPRIAELTGITTAMVRDAPPIEVVLPMLWEFAGFGGSD
TDTVLVAHNAGFDVGFLRSAAERCAQPWPNPPVLCTVRLARRILPRDEAPSVRLAALARL
FGVSNQPTHRALDDARATVEVLHGLIERVGNQGVRTYGDLRGYRSTVTAAQRRKRVLAAH
LPPDPGVYLFRAASGEVLYIGTATNLRRRVGQYFTGADPRVRMTEMVRLADRVDHVACAH
RLEAGVAELRLLAAHAPPYNRRSKFPRRWWWLVLSAEPFPRLSAVRAPHHDRAVGPFRSR
VEALATAELLAQLTGLRTCTRRLARSAVHHCPPHELAGCPTPDGTDRVGYAAAVQRAAAL
IDGADDAALAAGVAQVESLAAGHRYERAARLRDRLATAVEMLDRGQRLRALAAVPEMVAA
APDGAGGWHLAVIRYGRLAAAGSAPRGVPPLPVVDALRAAAQTVLVEAAPLGGALVEETA
LIVRWLSAPGVRLVRVDGDQGWSAPRAGAGRWSAWAATARSARLAAEQAPARAGGSSELL
TEPHPTREQLFGRAGVDRRGRAAQPVLPGRQPLRGADQSGVGDHRPGGVEDDRVAHRTRH
TG
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
gtgggtgccgacgacgccgaacagctcagcctgcccggcgtgggcacgccgggcaccctg
ggcgccgtctcggccgccgaggcgctcgatgagcaaccgctggccgcgaccactttcgtc
gtcgtcgacctggagaccaccggcggtgcgggctcggatgcgatcaccgaggtcggcgcg
gtcaaggtgcgcggcgggcgggtgctcggcgagttcgccaccttggtcgacccgcgccga
ggcatcccgccgcgcatcgccgagctgaccgggatcaccaccgcgatggtgcgcgacgcc
ccgccgatcgaggtggtgctgccgatgctgtgggagttcgccgggttcggcgggtccgac
acggacaccgtgctggtcgcccacaacgccggcttcgacgtgggattcctgcgcagcgcc
gcggagcgctgcgcccagccctggccgaacccgccggtgctgtgcaccgtccggctggcg
cgccgcatcctcccccgcgacgaggcgcccagtgtgcggttggccgcgctggcccgactg
ttcggggtgagcaaccaacccacccaccgcgccctcgacgacgcccgggcgaccgtggag
gtgctgcacggcctgatcgagcgggtcggcaaccagggcgtgcgcacctacggcgacctg
cgcggctaccggtcgacggtcaccgcggcgcagcggcgtaaacgcgtgctcgccgcgcac
ctgcccccggacccgggggtgtatctgttccgggccgcctccggggaggtcctctatatc
gggaccgccaccaacctgcggcgccgggtcggccagtacttcaccggggccgacccgcgt
gtccggatgaccgagatggtcaggctggccgaccgggtcgaccatgtcgcgtgcgcccac
cggctggaggccggggtcgccgagctgcggctgctggccgctcacgccccgccgtataac
cgtcggtcgaagttccctcggcgctggtggtggctggtgctgtccgccgagccgtttccg
cgactgtcggcggtgcgtgccccgcaccatgaccgcgcggtggggccgttccggtcccgg
gtcgaggcgctggccaccgcggagctgctggcgcagctgaccgggttgcgcacctgcacc
cgccggctcgcccgcagcgccgtgcaccactgcccgccgcacgagctggccggttgcccc
acccccgacggcaccgaccgggtcggctacgccgcggcggtgcagcgcgccgccgccctc
atcgacggcgccgacgacgccgcgctggcggccggggtggcccaggtcgagtccctcgcc
gccgggcaccgctacgagcgggccgcccggctgcgcgatcggctggccaccgcggtggag
atgctcgaccgcggtcagcggctgcgcgccctcgcggcggtaccggagatggtggccgcc
gcacccgacggcgccggcggctggcatctcgcggtcatccggtacggccggctcgccgcc
gccggctccgccccgcgcggggtgccgccgttgccggtggtcgatgccctgcgggcagcc
gcccagacggtgctggtcgaggcggccccgctgggcggggcgctggtcgaggagaccgcg
ctgatcgtccgctggctcagcgcccccggggtgcggctggtccgggtggacggcgaccag
gggtggtccgcgccgcgggcgggcgcgggccggtggtcggcgtgggcggccaccgcccgg
tcggctcggctcgccgccgagcaggcccccgcccgggccggcggctcctcagagctgctg
accgaaccgcacccaacgcgcgagcaactgttcggccgcgccggtgtcgatcgccgcggc
cgcgcggctcagcccgtcctcccaggccggcagccactccgcggcgctgaccagtccggc
gtgggcgaccatcgccccggcggcgttgaggatgaccgcgtcgcgcaccggacccgccac
accggctaa
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