Mycolicibacillus koreensis: MKOR_05640
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Entry
MKOR_05640 CDS
T06447
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
mkr
Mycolicibacillus koreensis
Pathway
mkr00470
D-Amino acid metabolism
mkr00550
Peptidoglycan biosynthesis
mkr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mkr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MKOR_05640 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MKOR_05640 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mkr01011
]
MKOR_05640 (murD)
Enzymes [BR:
mkr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
MKOR_05640 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
mkr01011
]
Precursor biosynthesis
Amino acid ligase
MKOR_05640 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
XdhC_C
DUF1805
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
BBY53313
LinkDB
All DBs
Position
629968..631428
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AA seq
486 aa
AA seq
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MGSLEPLSGDGPVLVAGAGVTGRAVLAALAPLPVRPTICDGDPATVRSFAEAGVTAISTA
EATRAIGDYRLVITSPGFAPGAPVLAAADAAGVPIWGDVELAWRLDRAAVYRPPRRWLVV
TGTNGKTTTTAMLAAMLTAAGLPAVACGNIGDPVLTVLDGPAEVLAVEASSFQLHWAPSL
RPDAGVVLNIAEDHLDWHGSMAAYAAAKARALTGRVGVAGLDDPVAAALLAAAPAATRVG
FRLGAPEAGQLGVRDGWLVDRAFAENVPLAPTDAIGVPGPVGVLDALAAAALARAVAVPA
EAVERALRGFSGAPHRGAVLTVADGIRYVDDSKATNPHAAEAAITAYPRVVWVAGGLLKG
ASVDDTVARVASRLVGAVVIGRDRAEIAKALSRHAPDVPVIEVVTGEDAGVRETGEPSVT
IETRWVGSGGGSLGTRVMTTAVAAARELARPGDTVLLAPAGASFDQFAGYTDRGEAFGAA
VQAATR
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgggctcgctggaaccgctgagcggcgacgggccggtgctggtcgccggggcgggggtg
accgggcgcgcggtgctcgccgcgctggcgccgctgccggtgcggcccaccatctgcgac
ggcgacccggcgacggtgcggtccttcgccgaggcgggagtcaccgcgatcagcaccgcc
gaggccacccgcgcgatcggcgactaccggctggtcatcaccagccccgggttcgctccc
ggcgccccggtgctcgccgccgccgacgccgccggcgtgccgatctggggcgatgtggag
ctggcctggcgactcgaccgcgcggcggtgtatcgcccgccgcggcgctggctggtggtc
accggcaccaacggtaagacgaccaccaccgccatgctcgccgcgatgctcaccgccgcc
gggttgccggcggtggcctgcggcaacatcggcgacccggtgctgaccgtgctcgacggc
cccgccgaggtgctggcggtggaggcgtcgagctttcagctgcactgggcgccgtcgctg
cggcccgacgccggggtggtgctcaacatcgccgaggaccacctcgactggcacggcagt
atggccgcctacgcggcggccaaggcccgcgcgctgaccggccgggtgggtgtcgccggc
ctcgatgaccccgtcgcggccgcgctgctggccgccgcgccggccgccacccgcgtcggt
ttccgcctcggcgcacccgaggcggggcagttgggggtgcgcgacggctggttggtcgac
cgtgccttcgccgagaacgtgccgctggcgcccaccgacgccatcggggtgcccgggccg
gtcggggtgctcgacgccctggccgccgccgccttagcgcgggcggtggcggttcccgcg
gaggccgtcgagcgcgccctgcgcgggttctccggcgcgccgcaccgcggcgcggtgctc
accgtcgccgacgggatccgctacgtcgacgactccaaggccaccaacccgcacgccgcc
gaggccgcgatcaccgcctacccgcgggtggtgtgggtcgccggcgggctgctcaagggc
gcctcggtcgacgacaccgtcgcgcgcgtcgcctcccggctggtcggggcggtggtgatc
ggacgcgaccgggccgagattgccaaggcgttatcacgacacgcgccggatgtgcccgtc
atcgaggtggtgacaggggaggatgctggtgtgcgtgagactggtgagccttctgtgact
attgagactcgttgggtcgggtccggtgggggcagcctgggcacgcgggtgatgaccacc
gccgtcgccgccgcccgcgagctggcccgccccggggacacggtgctgctggcccccgcc
ggcgcctccttcgaccaattcgccggctacaccgaccgcggtgaggcgttcggtgccgcc
gtgcaggccgcgacgcggtag
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