Mycolicibacillus koreensis: MKOR_15170
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Entry
MKOR_15170 CDS
T06447
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
mkr
Mycolicibacillus koreensis
Brite
KEGG Orthology (KO) [BR:
mkr00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MKOR_15170 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mkr03021
]
MKOR_15170 (rpoD)
Transcription machinery [BR:
mkr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MKOR_15170 (rpoD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_20
UPF0524
Motif
Other DBs
NCBI-ProteinID:
BBY54266
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All DBs
Position
1506240..1507670
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AA seq
476 aa
AA seq
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MYVAATKPSPATDKPVKRTATKAAATKASKAAKATSTAATDGAAKPTKAAAKKTTAGAAP
RKRAAKAAPAKKAAAKKAAPAKARTSRAKKDTAAADTGAATEADDPDLEAGPGASEIDAA
GEVTIEDLAEDTADEEIAEPSEKDKASGDFVWDEEESEALRQARKDAELTASADSVRAYL
KQIGKVALLNAEEEVELAKRIEAGLYATQKMAEFAASGEKLAVAYRRDMSWICRDGDRAK
NHLLEANLRLVVSLAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIR
QAITRAMADQARTIRIPVHMVEVINKLGRIQRELLQDLGREPTPEELAKEMDITPEKVLE
IQQYAREPISLDQTIGDEGDSQLGDFIEDSEAVVAVDAVSFTLLQDQLQSVLETLSEREA
GVVRLRFGLTDGQPRTLDEIGQVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
gtgtacgtggcagcgactaagccaagcccggcgaccgacaagccggtgaagcgcaccgct
accaaggccgccgccacgaaagccagcaaggccgccaaggccaccagcaccgccgcgacc
gacggtgcggcaaagccgaccaaggcggcggcgaagaagaccaccgcgggggccgctccc
cgtaaacgcgcggcgaaagccgccccggcgaagaaggccgccgcgaagaaggccgccccg
gccaaggcccgtaccagccgggcgaagaaggacaccgcggccgccgacaccggcgcggcc
accgaggccgacgatccggacctcgaggccggtccgggcgccagcgagatcgatgccgcc
ggtgaggtcaccatcgaggatctcgccgaggacaccgccgacgaggagatcgccgagccg
tcggagaaggacaaggcctcgggtgacttcgtctgggacgaagaggagtccgaggcactg
cgccaggcccgcaaggatgccgaactgaccgcatcggcggactcggtgcgcgcctacctc
aaacagatcggcaaggtggcgctgctcaacgccgaggaggaggtggagctcgccaagcgc
atcgaggccggtctctacgccacccagaagatggccgagttcgccgccagcggtgagaag
ctcgcggtggcctaccgccgcgacatgtcctggatctgccgcgacggtgaccgcgccaaa
aaccatctgctcgaggcgaacctgcggctggtggtgtcactggcgaagcgctacacgggt
cgaggcatggcgtttttggacctgatccaggagggcaacctgggcctgatccgcgcggtg
gagaaattcgactacaccaagggttataagttctccacctacgccacctggtggatccgc
caggccatcacccgcgccatggccgaccaggcgcgcaccatccgcatcccggtgcacatg
gtcgaggtgatcaacaagctcggccgcatccaacgggagttgctgcaggacctgggccgc
gagcccacccccgaagagctggccaaagagatggacatcaccccggagaaggtgctggag
atccagcagtacgcccgggaaccgatttcgctggaccagaccatcggcgatgagggcgac
tcgcagctcggcgacttcatcgaggacagcgaagcggtggtggccgtcgacgccgtctcg
ttcacgttgctgcaggaccagctgcagtcggtgctggagaccctctccgagcgggaggcg
ggtgtggtgcgcttgcggttcggcctcaccgacggccagccccgcaccctcgatgagatc
gggcaggtctacggggtcacccgggaacggatccgccagatcgaatccaagacgatgagc
aagctgcgccaccccagccgctcgcaggtgctgcgcgactacctcgattga
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