Mycolicibacillus koreensis: MKOR_15900
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Entry
MKOR_15900 CDS
T06447
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mkr
Mycolicibacillus koreensis
Pathway
mkr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mkr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MKOR_15900 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mkr03019
]
MKOR_15900 (pnp)
03016 Transfer RNA biogenesis [BR:
mkr03016
]
MKOR_15900 (pnp)
Enzymes [BR:
mkr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
MKOR_15900 (pnp)
Messenger RNA biogenesis [BR:
mkr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MKOR_15900 (pnp)
Transfer RNA biogenesis [BR:
mkr03016
]
Prokaryotic type
tRNA degradation factors
MKOR_15900 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_NusA_1st
S1_RRP5
KH_PNO1_2nd
KH_2
KH_KhpA-B
HAAS
Motif
Other DBs
NCBI-ProteinID:
BBY54339
LinkDB
All DBs
Position
complement(1575801..1578050)
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AA seq
749 aa
AA seq
DB search
MSVAEIDPGVFESTATIDNGSFGTRTIRFETGRLAQQAAGAVAAYLDDETMLLSATSAGK
TPKDHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAVLTCRLTDRPLRPSFVEGLR
NEVQVVVTVMSLDPNDLYDVVAINAASASTQLAGLPFSGPVGAVRVALIDGTWVAFPTVE
QLGRAVFDMVVAGRKVDTAEGSDVAIMMVEAEATDNVIALVEAGAQAPTEAVVAEGLEAA
KPFIATLCTAQRELADAAAKPTGEFPLFPPYGEDVYYSVASLATDELAKALSIAGKTERN
DRTDEIKAEVAERLAETYEGREKEVSAAFRSLTKKLVRQRILTDHFRIDGRGVTDIRALS
AEVAVVPRAHGSALFERGETQILGVTTLDMVKMAQQIDSLGPETSKRYMHHYNFPPYSTG
ETGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALSSNGSTSMGSVCASTL
SLLNAGVPLKAPVAGIAMGLVSDDVEIDGKTERRFVALTDILGAEDAFGDMDFKVAGTKD
FVTALQLDTKLDGIPSQVLAGALSQAKDARLTILDVMAEAIDEPDEMSPYAPRVTTIKVP
VDKIGEVIGPKGKIINSITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAIANPQLP
KIGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGRGKRIAKVEDVVSVGDKLRVEIAD
IDNRGKISLVLVAEDAADAAPADATAADS
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcgctgaaatcgatcccggcgtcttcgaatccaccgccaccatcgacaacggg
agcttcggcacccgcaccatccgtttcgagaccggtcggctggcccagcaggccgccggc
gccgtcgccgcctacctcgacgacgagaccatgctgctctcggcgaccagtgccggcaag
accccgaaggaccacttcgacttcttcccgctgaccgtggacgtcgaggagcggatgtat
gccgccgggcgcatcccggggtcgttcttccgccgcgagggccgtccgtcgaccgacgcg
gtgctgacctgtcgtctcaccgaccgcccgctgcgtccctcgttcgtcgaggggctgcgc
aacgaggtccaggtcgtggtgaccgtgatgagcctggaccccaacgacctctacgacgtg
gtggcgatcaacgccgcctcggcctccacccagctggccggcctgccgttctccggcccg
gtcggtgcggtgcgggtggccctcatcgacggcacctgggtggcgttccccaccgtggag
cagctgggccgcgcggtgttcgacatggtggtggccgggcgcaaggtcgacaccgcggag
ggctccgacgtggcgatcatgatggtcgaggcggaagccaccgacaacgtcatcgcactc
gtcgaggccggcgcgcaggcacccaccgaggcggtggtggccgaggggctcgaggcggcc
aagccgttcatcgccacgctgtgcaccgcccagagggaactggccgatgcggcagccaaa
cccaccggcgaattcccgctgttccccccttacggggaggacgtctactactcggtggcc
tcgctggcgaccgacgagttggccaaggcgttgagcatcgccggcaagaccgagcgcaac
gaccggaccgacgagatcaaagccgaggtcgccgaacgactcgccgagacctacgagggc
cgggagaaggaagtcagcgcggcgttccgctcgctgaccaaaaaactggtgcgccagcgc
atcctgaccgaccacttccgtatcgacggccgtggcgtcaccgacatccgcgcgctctcc
gccgaggtggcggtcgtgccgcgcgcgcacggcagcgcgctgttcgagcgcggtgagacc
cagatcctgggcgtgaccaccctcgatatggtcaagatggcccagcagatcgactcgctg
ggtccggagacctccaagcgctacatgcaccactacaacttcccgccgtactcgaccggg
gagaccggccgggtcggctcgcccaagcgtcgcgagatcggtcacggcgcgctcgccgag
cgggccctggttccggtgctgcccagcgtcgaggagttcccctacgcgatccggcaggtg
tcggaggcgttgagctccaacggatcgacctccatgggctcggtctgtgcctccacgctg
tcgctgctcaacgccggtgtgccgctgaaggccccggtcgccggcatcgccatggggctg
gtctccgacgatgtggagatcgacggcaagaccgagcgccgcttcgtcgcgctgaccgac
atcctcggagccgaggatgcgttcggcgacatggacttcaaggtcgccggcaccaaggac
ttcgtcaccgccctgcaactggacaccaagctcgacgggatcccctcgcaggtgctggcc
ggggcgttgagccaggccaaggacgcgcggctgacgatcctggacgtgatggccgaggcg
atcgacgagcccgacgagatgagcccgtacgcgccgcgggtgaccacgatcaaggttccg
gtggacaagatcggtgaggtgatcgggcccaagggcaagatcatcaactcgatcaccgag
gagaccggcgcccagatctcgatcgaggacgacggcaccgtgttcgtcggcgccaccgac
gggccgtccgcgcaggccgcgatcgacaagatcaacgcgatcgccaacccgcagctgccc
aagatcggggagcggttcctgggcaccgtggtcaagaccaccgacttcggggcgttcgtg
tcgctgctgcccggccgcgacggcctggtgcacatctcgaagctgggccggggcaagcgc
atcgccaaggtcgaggacgtggtcagcgtcggcgacaaactgcgggtggagatcgccgac
atcgacaaccgcggcaagatctcgttggtgttggtcgccgaggacgctgccgatgccgcg
cccgccgatgcgaccgctgccgacagctga
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