Mycolicibacillus koreensis: MKOR_22170
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Entry
MKOR_22170 CDS
T06447
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mkr
Mycolicibacillus koreensis
Pathway
mkr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mkr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MKOR_22170 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mkr03021
]
MKOR_22170 (rpoA)
03400 DNA repair and recombination proteins [BR:
mkr03400
]
MKOR_22170 (rpoA)
Enzymes [BR:
mkr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MKOR_22170 (rpoA)
Transcription machinery [BR:
mkr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MKOR_22170 (rpoA)
DNA repair and recombination proteins [BR:
mkr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MKOR_22170 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
BBY54966
LinkDB
All DBs
Position
complement(2244253..2245296)
Genome browser
AA seq
347 aa
AA seq
DB search
MLISQRPTLSEEVIAENRSQFIIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDIILNLKGLVVSSEEDEPVTMYLRKQGPGEVTAGDIVPPAGVTVHN
PDMHIATLNDKGKLEVELVVERGRGYVPAVQNKATGAEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLILDVETKNSITARDALASAGKTLVELFGLARELNVEAEGIEIGPSPAE
ADHIASFALPIDDLDLTVRSYNCLKREGVHTVGELVARTESDLLDIRNFGQKSIDEVKVK
LHQLGLALKDSPASFDPSEVAGYDAASGTWSADAAYDDQDYAETEQL
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgctgatctctcagcgtcccaccctgtccgaagaggtcatcgccgagaaccggtcgcag
ttcatcatcgaaccgctcgagcccggattcggctacaccctggggaactcgttgcggcgc
accctgctgtcgtcgattcccggtgcggccgtcaccagcatccgcatcgacggggtgctg
cacgagttcaccaccgtgcccggggtcaaagaggacgtcaccgacatcatcttgaacctc
aagggcctggtcgtctcctccgaggaggacgagccggtcaccatgtacctgcgcaagcag
ggtcccggtgaggtcaccgccggtgacatcgtgccgccggccggggtcaccgtgcacaac
ccggacatgcacatcgcgaccctgaacgacaagggcaagctcgaggtcgagttggtcgtc
gagcgcggccgcggctacgtgcccgccgtgcagaacaaggccaccggcgccgagatcggc
cggatcccggtcgactcgatctactcgccggtgctcaaggtgacctacaaggtggaggcc
acccgtgtcgagcagcgcaccgacttcgacaagctgatcctcgacgtcgagaccaagaac
tccatcaccgcccgcgacgccctggcgtcggccggcaagaccctggtggagctgttcggg
ctggcccgcgagctcaacgtcgaggccgagggcatcgagatcggaccgtcgccggcggag
gccgaccacatcgcgtcgttcgcgctgccgatcgacgacctggacctgaccgtgcgctcc
tacaactgcctcaagcgtgaaggcgtgcacaccgtcggggagttggtcgcccgcaccgag
tccgacctgctcgacatccgcaacttcggtcagaagtccatcgacgaggtgaaggtcaag
ctgcaccagctgggcctggcgctcaaggacagcccggccagcttcgacccgtcggaggtc
gccggctacgacgccgccagcggcacctggtcggctgacgccgcctacgacgaccaggac
tacgccgaaaccgagcagctgtaa
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