Mycolicibacillus koreensis: MKOR_23270
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Entry
MKOR_23270 CDS
T06447
Symbol
recB
Name
(GenBank) RecBCD enzyme subunit RecB
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
mkr
Mycolicibacillus koreensis
Pathway
mkr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mkr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MKOR_23270 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mkr03400
]
MKOR_23270 (recB)
Enzymes [BR:
mkr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MKOR_23270 (recB)
DNA repair and recombination proteins [BR:
mkr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MKOR_23270 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
AAA_30
PDDEXK_1
UvrD_C_2
AAA_25
Motif
Other DBs
NCBI-ProteinID:
BBY55076
LinkDB
All DBs
Position
2348682..2352008
Genome browser
AA seq
1108 aa
AA seq
DB search
MSAAPFELSGPLPSPGSTLVLEASAGTGKTFALAGLVTRYVADGHATLDQLLLITFGRVA
SRELRERVRDQIAAALAVLEDRRSPANTFETQLRDVDEAVRAERVRRLRAALAGFDAATI
VTIHQFCSLVLKSLGVAGDTDPSVTLVESLTDLVTEIVDDLYLARFGHDENPPALTRNEA
LELATRVVEDPAAQLRPRDPEPGSATAARRQFALEVLDELDRRKRRLGVLGYNDLLTRLA
DSLSQAGSDAAERMRRRWSIVMVDEFQDTDPVQWQVIDRAFRGHSTLVLIGDPKQAIYGF
RGGDIYTYLAAARSADDRRTLTTNYRSDAVLVDSLQVLLGGAQLGHPEIVAQPVAADRPG
HRLSGAPHNAPVRLRVVARDTVGASGTQTVPISVLRDHIPADLAADIGALLGSGAQFDGR
PVQAGDIAVIVGAHADARACRDALVEAGIPVVYTGDTDVFTSPAARDWLCLLEAFDQPHR
SALVRAAACTAFFGETAETLSREGDLLTDRVADTLREWTDHARSAGIAAVLEAAQLAGMG
RRVLSRHGGERLMTDLVHVGQLLQEAAHRDRLGLPGLRDWLRRQCEERTGAAERNRRLDS
DAAAVQIMTVFVAKGLQFPIVYLPFAFNRHIFRDEILLYHDTADGADVRCLHLGGRHAPD
RRAVNELHRLEAARDNIRLTYVALTRAQSQVVAWWAPTYDEVNGGLSRLLRGRRRGEAEV
PVACERAVTDADAWAVFTDWQQAGALTLEPSVVGPPVTAPRQEADGPFAVRHFDRAIDLG
WRRTSYSALLRHAEQAGTAGVHSEPEVAVRSDEPFDEPFDEPQIAAAATGVADTPGTQIR
SPMADLPRGAAFGSLVHATLETTDPTAADLTAALRTEIERHTQWWPIDVAPADLAVALLP
MQDTPLGPLAEDLTLRQIGLQDRLCELDFEIPLMGGDGPDGPELRLADLAPLLREHLPAS
DPFACYADRLASEALGGQSLRGYLSGSIDAVLRLPGPRYLVVDYKTNFLGESAGDYGPAA
LVEAMLHSDYPLQALLYAAVAHRFLRWRQPDYNPRRHLGGVVYLFLRGMCGPDTPRIDDH
PTGVFSWLPPPGLVTALSELLHRGPVAS
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgccgcgccgttcgagctgtccggcccgctaccctcccccgggtccaccctggtg
ctggaggccagcgccggcaccggcaagacgttcgcgctggcgggcctggtcacccggtac
gtcgccgacggccacgccaccctcgaccagttgctgctgatcaccttcggccgggtggcc
agccgggagttgcgcgagcgggtgcgcgaccagatcgccgccgcactcgcggtgctcgaa
gaccggcgcagcccggccaacacattcgaaacccagctgcgcgacgtcgacgaggcggtg
cgcgccgagcgggtgcgccggcttcgggcggcgctggccgggttcgacgccgccaccatc
gtcaccatccaccagttctgttcgctggtgctcaaatcgttgggggtcgccggggacacc
gacccatcggtgaccctggtggagagcctcaccgatctggtcaccgagatcgtcgacgac
ctctatctggcccggttcggccacgacgagaacccgccggcgctcacccgcaacgaggcc
ctggagctggcgacccgcgtcgtcgaggacccggccgcacagctgcgaccgcgtgatccc
gagccgggctcggcgaccgccgcgcgccggcagttcgccctggaggtgctcgacgagctg
gaccggcgcaaacgccgcctgggggtgctcggctacaacgacctgctgacccggctggcg
gattcgttgagccaggccggatctgatgccgccgaacggatgcggcggcgctggtcgatc
gtgatggtcgacgagttccaggacaccgacccggtgcagtggcaggtcatcgaccgggcg
tttcgcggccactccacgctggtgttgatcggtgacccgaaacaggccatctacgggttt
cgcggcggcgacatctacacctatctggccgccgcccgcagcgccgacgaccggcgcacc
ctgaccaccaactaccgcagcgacgccgtgctggtcgacagcctgcaggtgctgctcggc
ggtgcgcagctgggccacccggagatcgtggcgcagccggtcgcggcggaccggcccggt
caccggctcagcggggcaccgcacaacgcgccggtgcggctgcgggtcgtggcccgcgac
accgtgggcgccagcggaacccagacggtgccgatctcggtgctgcgcgaccacatcccc
gccgatctggccgccgacatcggcgcattgctgggctccggggcgcagttcgacggccgg
ccggtgcaagccggtgacatcgcggtcatcgtcggtgcgcacgccgacgcccgggcctgc
cgcgacgcactggtcgaggcgggcatcccggtggtctacaccggcgacaccgacgtgttc
acctcaccggccgcccgggactggctgtgcctgctggaggcgttcgaccagccgcaccgc
agcgcgctggtgcgggccgcggcgtgcaccgcgttcttcggggagaccgccgagacgttg
tcgcgcgagggcgacctgctcaccgaccgggtcgccgacacgctgcgcgagtggaccgat
catgcccgcagcgccgggatcgccgcggtgctcgaggccgcccaactcgccgggatgggc
cggcgggtgctcagccggcacggcggggaacggctgatgaccgacctggtgcacgtcggt
cagctcctgcaggaggccgcccaccgtgaccggctggggctgcccggcctgcgcgactgg
ctgcgccggcagtgcgaggagcgcaccggcgccgccgaacgcaaccgccggttggacagc
gacgccgcggccgtgcagatcatgaccgtgttcgtcgccaagggcctgcagttcccgatc
gtgtacctgccgttcgcgttcaaccggcacatcttccgcgacgagatcctgctctatcac
gacaccgccgacggcgccgacgtccgctgtctacacctcggtgggcggcacgccccggat
cggcgtgcggtcaacgagttgcaccggctcgaggccgcccgcgacaacatccggctcacc
tatgtcgcgttgacccgggcgcaaagccaggtggtggcgtggtgggccccgacctacgac
gaggtcaacggcgggttgtcgcggctgctacgcggccggcgccgcggcgaggcggaggtc
ccggtggcctgcgagcgcgccgtcaccgacgccgacgcgtgggcggtgttcaccgactgg
caacaggccggggcgctgacgctggagccctcggtggtgggcccgccggtcaccgcgccc
cggcaggaggccgacggcccgttcgcggtgcgccacttcgatcgcgcgatcgacctcggg
tggcggcgcacctcctattcggcgttgctgcgccacgccgagcaggccggaaccgccggg
gtgcattcggagccggaggtcgcggtgcgttccgacgagcccttcgatgaacccttcgac
gaaccccagatcgccgcggccgccaccggcgtcgccgacactcccggtacccagatccgt
tcgccgatggccgatctgccacgcggggcggcgttcgggtccctggtgcacgccacgctg
gagaccaccgacccgacggcagctgatctgacagcggcgttgcgcaccgagatcgaacgg
cacacccaatggtggccgatcgacgttgcccccgccgatctggccgtcgcgttgctgccg
atgcaggacacccccctggggccgctggccgaggatctgaccctgcgtcagatcggtctt
caggatcggttgtgcgagttggatttcgagatccccctgatgggcggtgacggcccagac
ggcccggagttgcgactggccgacctcgccccgctgctgcgtgagcacctgcccgcctcc
gatccgttcgcctgctacgccgaccggctggcctcagaagccctcggcggccaatcgttg
cgcggttacctgtccgggtcgatcgacgccgtgctgcgcctgcccggcccccgctatctg
gtggtcgactacaagaccaactttctgggcgagtcggcgggcgactacggccccgcggcg
ctggtcgaggcgatgctgcactcggactacccgctgcaggcactgctgtatgcggcggtg
gcacaccggttcctgcggtggcgccagcccgactacaatccgcggcgccacctcggcggt
gtggtgtatctgttcctacgcggcatgtgcgggcccgacaccccccgcatcgacgaccat
ccgaccggggtgttcagttggctgccgccaccgggattggtcaccgccctctcggagttg
ctgcaccgcgggccggtggcgtcatga
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