Mycobacterium kubicae: I2456_04855
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Entry
I2456_04855 CDS
T07774
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mku
Mycobacterium kubicae
Pathway
mku03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mku00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
I2456_04855 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mku03400
]
I2456_04855 (recD)
Enzymes [BR:
mku01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
I2456_04855 (recD)
DNA repair and recombination proteins [BR:
mku03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
I2456_04855 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
AAA_22
RecD_N
Helicase_RecD
UvrD-helicase
SH3_13
PhoH
AAA_28
TraI_hel_assoc_N
nSTAND3
AAA_16
DUF3322
T2SSE
Mg_chelatase
AAA_5
Herpes_Helicase
ResIII
SRP54
NACHT
NTPase_1
TrwB_AAD_bind
AAA_29
AAA
CbiA
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
QPI38852
UniProt:
A0AAX1JCA3
LinkDB
All DBs
Position
complement(1028983..1030725)
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AA seq
580 aa
AA seq
DB search
MSIDVVDPADWRQAHSATGILRTFTDAGVLESADVHVAQRLCAMVEESQPPVLLAVALVV
RALRGGSVCVDLRSVEAQVGVADLPWPAADDWLAAVRASPLVGSPPVLRVYADSLLYLDR
YWREEQQVADDLVALLPARAVAPGEGALIDRLFPHPFEEQRAAAKVALAQGLTVLTGGPG
TGKTTTVARLLALFAEEAQRDGKPPIRIALAAPTGKAAARLHEAVQREVDNLDQADRQRV
SGLRATTLHRLLGSRPDTSSRFRHHRGNRLPHDVIVVDETSMVSLTMMARLLEAVRPQTR
LLLVGDPDQLASVEAGAVLADLVDGLGARADTHIAALQTSHRFGESIGELASSIRAGDAD
RVVAVLRTPDDHIEWIDTDDPTEQLRKVLVPHGLLLRQAAVLGDASAALATLDEHRLLCA
HRRGPYGIQHWNRQVERWLSEATGEPIWSSWYAGRPILVTANDYGLGVYNGDTGVTVVAE
GALRAVIAGADEPHAFATSRLSDVETVHAMTIHKSQGSQADEVTVLLPSADSRLLTRELF
YTAVTRAENKVRVVGPEADVRAAVAHRAIRATGLRRRLQP
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
gtgagcatcgacgtcgtcgaccccgccgactggcggcaggcgcacagcgcgaccgggatt
ctgcgcaccttcaccgacgctggtgtgctggagtcggccgatgtccatgtggcacaacgc
ctttgcgccatggtcgaggagtcgcagccgccggtgctgctcgcggtcgcgttggtggtg
cgggcgctgcggggcggctcggtgtgtgtcgacttgcgctcggtcgaagcgcaagtaggt
gtcgccgacttgccgtggccggcagctgacgactggctggcggcggtgcgggccagccca
ctggtggggtcgccgcccgtgctgcgtgtgtacgccgacagtctgctgtacctggaccga
tattggcgggaggaacaacaagtcgccgacgacctggtggccctgctgccggcgcgtgcc
gtggcaccaggagagggcgcccttatcgaccggttgttcccccacccgttcgaagaacaa
cgcgcggcggcgaaagtcgccttggctcagggcttgaccgtgctgaccggcgggccggga
acgggcaagaccaccacggtggcacggctgctggcgctgttcgccgaagaggcgcagcgc
gacggcaagccgccgatacgcatcgcgctggcggcgccgaccggaaaagcggcggcccgg
ctgcacgaggcagtgcaacgcgaggtcgacaacctcgaccaggccgatcggcaacgggtc
tcggggttgcgggccaccacgttgcaccggctattgggcagccggccggatacgtcgtcg
cggttccgccaccatcgcggtaaccggttgccgcacgacgtgatcgtggtcgacgagacg
tcgatggtgtcgctgacgatgatggcccgactgctggaggcggtgcgcccgcagacgcgg
ttgctgctcgtcggtgatcccgaccagttggcgtcggtggaggccggtgcggtgttggcc
gacctggtcgacggtctgggggcgcgcgccgatacccacatcgcggcgctgcagacctcg
catcgattcggcgagtcgatcggcgagctggcgtcgtcgatccgcgcgggcgacgccgac
cgggtcgtggcagtgttgcgcaccccggacgaccacatcgagtggatcgacaccgacgac
ccgaccgaacagttgcgcaaagtgcttgtgccgcatgggcttctactccgccaggccgcc
gtgctcggcgacgcgtcggcagcgctggcgacgctcgacgagcaccggttgctgtgtgcc
catcgacgcggaccatacggaattcagcactggaatcgccaggtcgagcgctggctgagt
gaggcgaccggcgagccgatctggtcgtcctggtatgccgggcgcccgattctggtgacc
gccaacgactatggactcggcgtgtacaacggtgacaccggggtgaccgtcgtggccgag
ggcgcgctgcgtgccgtcatcgccggcgccgacgaaccacacgcgttcgcgacgagccgg
ttgtccgacgtggagacggtgcacgccatgacgattcacaagagtcagggcagtcaggcc
gacgaggtgacggtgctgctgccctcggcggattcccgcctgctgacccgcgagctgttc
tacacggcggtcacccgggcggagaacaaagtgcgagtcgtcgggccggaggccgatgtg
cgagccgccgtggcgcaccgggccattcgggcaacggggctgcgccgtcggctacagccg
tga
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