Mycobacterium kubicae: I2456_04860
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Entry
I2456_04860 CDS
T07774
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
mku
Mycobacterium kubicae
Pathway
mku03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mku00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
I2456_04860 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mku03400
]
I2456_04860 (recB)
Enzymes [BR:
mku01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
I2456_04860 (recB)
DNA repair and recombination proteins [BR:
mku03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
I2456_04860 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
PDDEXK_1
AAA_30
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
QPI38853
UniProt:
A0AAX1JBF3
LinkDB
All DBs
Position
complement(1030722..1034027)
Genome browser
AA seq
1101 aa
AA seq
DB search
MTPAEQVFDLLGPLPAERTTTVLEASAGTGKTFALAGLVTRYVAEGHAKLDEMLLITFGR
AASQELRERVRCQMVEAVRAFDDPSVVGANQLVAHLIDGTEPERDARRQRLRDALAGFDA
ATIATTHQFCQLVLKSLGVAGDTDSGVTLVEDLDELVTEIVDDLYLAHFGRERDDPVLSY
RDAARIARTVVANPSTQLRPLHPEPGSRAAICVGFAEAVVAELETRKRRRGILGYDDLLI
RLADALDTEDSPARVRMHQRWPIVMVDEFQDTDPVQWQVIDRAFSGRSTLVLIGDPKQAI
YAFRGGDIVTYLRAAQSAGDKRTLATNWRSDSTLVQRLQAVLLGAQLGDPAIVVRHVDAY
HQGHRLAGAPHNDPFRLRVVRRATFGRKATQNLAIDDLREHIGADLAADIGGLLTSGATF
DGKPLQARDIAIIVEKHKDARACHRALTDAGIHAVYTGDSDVFGSEAADDWLSLLEAFDQ
PHRPGVVRAAAATMFFGKTAKDLAAGGDALTDRIAETLREWAGYARERGVAAIFEAAQLT
GMSDRVLSWQDGERHMTDLAHVTQLLQETAHRERFTLPALRDWLRTQRAERGGATERNRR
IDSDAAAVQIMTVWVSKGLQYPVVYLPFAFHRTVQERDLVLFHDRGERCLHIGGKDSPDF
AAVERLGAQETASDDSRLTYVAMTRAQAQVVAWWSPAYYEPNGGLSRLLRGRRPGEPVVP
DRCEPAKITDDDAWARFQEWQAAGGPVVEESLIADAPPAVIGAAPTDLGTRHFHRSIDTD
WRRTSYSGLIRVAETTGVSSEPEITELDDEVGDIPMAGAASVSDVPSPMAELPSGAKFGS
LVHAVLETSDPFAADLAAELEAQIQVHSAWWPVDVPAPELAAAMVPMHDTPLGPLATGLT
LRQIGLRDRLRELDFEFPLAGGDLRADAPDIRLADVGVLLGSHLRDGDPLRSYADRLTGD
TLGGQSLRGYLTGSVDAVLRIDDGQRYLVVDYKTNWLGDRDRPLTAADYSQPRLAEAMLH
SDYPLQALLYSVVLHRFLRWRQPNYDPARHLGGVLYLFVRGMCGPQTPVIDGHPAGVFSW
APPPALVTALSDLLDVGRSAA
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgacaccagccgagcaagtattcgacctgctgggcccgctgcccgccgagcgcaccacc
acggtgctcgaggccagcgccggcaccggcaagacgttcgcgttggccggtctggtcacc
cgctacgtcgccgaaggccacgccaagctggacgaaatgctgctcatcaccttcgggcga
gccgccagccaagagctgcgcgagcgggtgcgctgccagatggtcgaggcggtacgggct
ttcgatgacccgtcggtcgtcggggccaaccaactggtggcacacctgatcgacggcacc
gagcccgaacgcgacgcgcgcaggcagcggctgcgcgacgcgctggccggtttcgacgcc
gcaaccatcgcgaccacccatcagttctgccaactggtgttgaaatcgctaggcgtggcg
ggcgacaccgactccggtgtcaccctcgtggaagatctcgacgaactggtcaccgagatc
gtggacgatctgtacctggctcacttcgggcgcgagcgcgacgacccggtcctcagctac
cgggacgcggcccggatcgcgcggacggtggtggccaacccgtcgacgcagctgcgcccg
ttacaccccgaacccggatcccgcgcggccatctgtgtcggctttgccgaagccgttgtc
gcagaactcgaaacgcgcaagcggcgccgcggcatcctcggctacgacgacctgctcatc
cggctggccgacgcgctggacaccgaggattcgccggcccgggtcaggatgcatcagcgc
tggcccatcgtgatggtcgatgagttccaagacaccgatccggtgcaatggcaggtgatc
gaccgcgcattcagcggccggtccacgctggtgctgatcggtgatccgaagcaggcgatt
tatgcgtttcgcggcggtgacatcgtcacctacctgcgcgcggcgcaatccgccggcgac
aagcggacattggccaccaactggcgcagcgacagcactctggtgcagcgtttgcaggcc
gtcttgctgggcgcgcagctgggcgatccggcgatcgtggtccgccacgtcgacgcctac
caccaggggcaccggctggcgggcgccccacacaacgatccgttccggttgcgggtggtg
cgccgggcgacgttcgggcgcaaggcaacccagaacctggcgatcgacgacctacgcgaa
cacatcggtgccgacctcgccgccgacatcggcggattgctgaccagcggcgccaccttc
gacggcaagccgctgcaggcgcgcgacatcgcgatcatcgtcgaaaagcacaaggacgcc
cgggcctgccaccgcgcgctgaccgacgcaggcattcacgccgtgtacaccggcgactcc
gacgtgttcggctccgaggccgccgacgactggctgtcgctgctggaagccttcgaccaa
ccgcaccgccccggcgtggtccgcgcggccgccgccaccatgttcttcggcaagaccgcc
aaagaccttgccgccggcggtgatgcgttgaccgatcgcatcgccgagaccttgcgagag
tgggcgggctatgcccgcgagcgtggggtggccgccatcttcgaagccgcgcagttgacc
ggtatgagcgaccgcgtgctgtcctggcaggacggcgaacggcacatgaccgacctcgcc
cacgtcacgcagctgttgcaggagaccgcgcaccgggagcgcttcacattgccggcgctg
cgggattggctgcgcactcagcgtgcggagcgcgggggcgccaccgaacgcaaccgccgc
atcgacagcgacgccgcagcggtgcagatcatgacggtgtgggtgagcaagggcctgcaa
tatccggtggtgtatctgccgttcgcgttccaccgcaccgttcaggaacgggacctggtg
ctgtttcacgaccgcggtgagcgctgcctgcacatcggcggcaaggacagtcccgacttc
gccgccgtcgagaggctgggcgcccaggaaaccgccagcgacgacagccgcttgacgtac
gtcgcgatgacgcgcgcccaggcccaggtggtcgcctggtggtcgccggcctactacgaa
cccaacggcgggctctcccggttgttgcggggccggcgacccggggagccggtggtgccc
gaccgttgtgagccggccaagatcaccgacgacgacgcctgggcccgcttccaagaatgg
caagccgcgggcggtccggtggtcgaagagtcgctgatcgccgacgcgccaccggcggtc
atcggcgcggcgccaaccgatctgggcacccggcatttccatcgcagtatcgacaccgac
tggcggcgcacgtcctattccggactgatccgggtcgccgagaccaccggcgtcagcagc
gaaccggaaatcaccgaactcgacgacgaagtcggcgacattccgatggccggggcggca
tcggtatcggacgtgccctcccccatggccgagttgccgtcgggggcgaagttcgggtcg
ctggtgcacgcggtgctcgagaccagcgacccgttcgcggccgatctcgccgccgaactg
gaggcgcagatccaggtgcactcagcgtggtggccagtggatgttccggcccctgagctt
gccgccgcgatggtcccgatgcacgacaccccgctgggtccgttggctacgggattgacc
ctgcgccagatcgggctgcgggaccgcctgcgtgagttggacttcgagttcccgttggcc
ggcggtgacctgcgcgcggacgcacccgatattcgactggccgacgtcggggtgctgctc
gggtcgcatcttcgggacggtgacccgctgaggtcgtatgccgaccggttgaccggtgac
acgctgggcggtcagtcgttgcgcggctatctcaccggttcggtcgacgcggtgttgcgc
atcgacgacgggcagcgctatctggtggtcgactacaagaccaactggctgggtgatcgg
gaccgaccgttgaccgcggccgactacagccagccgcgactggccgaggcgatgctgcac
tcggactatccgctgcaagcgctgctgtacagcgttgtgctgcaccgttttctgcgctgg
cgccagccgaattacgaccctgcgcgccatctcggtggtgtcctgtatctgttcgtgcgc
ggcatgtgcgggccgcagactccggtgatcgacggtcatccggccggggtgttcagttgg
gcgccgccgcccgcactggtcacggcgctgtccgatcttctcgacgtggggaggtcggcc
gcgtga
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integrated database retrieval system
