Mycobacterium kubicae: I2456_05570
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Entry
I2456_05570 CDS
T07774
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mku
Mycobacterium kubicae
Pathway
mku03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mku00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
I2456_05570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mku03021
]
I2456_05570
03400 DNA repair and recombination proteins [BR:
mku03400
]
I2456_05570
Enzymes [BR:
mku01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
I2456_05570
Transcription machinery [BR:
mku03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
I2456_05570
DNA repair and recombination proteins [BR:
mku03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
I2456_05570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
QPI38975
UniProt:
A0AAX1JBT0
LinkDB
All DBs
Position
1161858..1162901
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AA seq
347 aa
AA seq
DB search
MLISQRPTLSEEVITDSRSQFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDIILNLKGLVVSSEEDEPVTMYLRKQGPGEVTAGDIVPPAGVTVHN
PSMHIATLNDKGKLEVELVVERGRGYVPAVQNRASGAEIGRIPVDSIYSPVLKVTYKVDA
TRVEQRTDFDKLILDVETKSSISPRDALASAGKTLVEFFGLARELNVEAEGIEIGPSPAE
ADHIASFALPIDDLDLTVRSYNCLKREGVHTVGELVSRTESDLLDIRNFGQKSIDEVKVK
LHQLGLSLKDSPPTFDPSEVAGYDVATGTWSTEGAYDDQDYAETEQL
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgctgatttctcagcgacccaccttgtccgaggaagtcatcaccgacagccggtcccag
ttcgtcatcgaaccgctggagccgggttttggctacacccttggcaattcgctgcgccgg
acgctgctgtcgtccattcccggcgcggccgtcaccagcatccgcatcgacggcgtgctg
cacgaattcaccacggtcccgggcgtcaaggaagatgtcaccgacatcatcctgaacctc
aagggcctggtcgtgtcctccgaggaggacgagccggtcaccatgtacctgcgcaagcag
ggcccgggcgaggtcaccgccggtgacatcgtgcccccggccggtgtcacggtgcacaac
ccctcgatgcacatcgcgacgttgaacgacaagggcaagctcgaggtcgagctcgtcgtc
gagcgtggccgcggctatgtgccggccgtgcagaaccgcgcttcgggtgccgaaatcggc
cgtatcccagtcgattccatctactcgccggtgctcaaggtcacctacaaggtggacgcg
acgcgtgtcgagcagcgcaccgacttcgacaagttgatcctggacgtggagaccaagagc
tcgatcagcccccgcgacgccctggcgtcggcgggtaagacgctggtcgaattcttcggt
ctggcgcgcgaactcaatgtcgaggccgaaggcatcgagatcgggccgtcgccggccgag
gccgaccacatcgcgtcgttcgctctgccgatcgacgacctggacctgaccgtgcggtcc
tacaactgcctcaagcgcgagggcgtgcacacggtcggagagctggtgagccgcaccgag
tccgacctgctcgacatccgcaacttcggtcagaagtccatcgacgaggtcaaggtcaag
ctgcaccagctgggtctgtcgctcaaggacagcccgcccaccttcgacccgtcggaggtt
gctggttacgacgtcgccaccggtacctggtccaccgagggtgcctatgacgaccaggac
tacgccgaaaccgaacagctctaa
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