Mycobacterium kubicae: I2456_10005
Help
Entry
I2456_10005 CDS
T07774
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mku
Mycobacterium kubicae
Brite
KEGG Orthology (KO) [BR:
mku00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mku03016
]
I2456_10005
Enzymes [BR:
mku01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
I2456_10005
Transfer RNA biogenesis [BR:
mku03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
I2456_10005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
QPI39749
UniProt:
A0AAX1JH25
LinkDB
All DBs
Position
complement(2092323..2093636)
Genome browser
AA seq
437 aa
AA seq
DB search
MGGPEANPPDSTESTESAESAPATPVPLVHPADGIPALSVSARQIEAAAALLDRGHGPFA
VDAERASGFRYSNRAYLIQIRRAGAGTVLIDPVSHGGDGPTVLAPVAEVLAKDEWILHSA
DQDLPCLAEVGMYPPALYDTELAGRLAGFERVNLATMVERLLGFGLAKGHGAADWSKRPL
PIEWLNYAALDVELLIELRAAIAAVLAEQGKSDWAAQEFEYLRTAIPAAARKDRWRRTSG
IHRVHDRRGLAAVRELWTMRDRIAQRRDIAPRRILPDSAIVDAALADPKSVADLVALPVF
GGRNQRRSAAMWLSALEAARQNQHPPDEGEPATTPPPPARWGRRKPEAAARLEAARAALA
KVSQRVTVPTENLVSPDLVRRLCWDWDSVHDGDAEQAVAEYLRAGQARPWQRELVVSPLA
TALSQAANVATDVPTDD
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgggtggaccggaggccaatccgccggacagcacggagagcacggaaagcgccgaaagc
gcgccggccactcctgtcccactcgtccacccggccgacgggataccggccctctcggtc
agcgcacgccagatcgaggcggctgccgcactgctcgaccgcggacatgggcccttcgcg
gtggacgccgaacgggcgtcgggctttcgctactccaaccgggcctatttgatccagatc
cggcgggccggggcgggcactgtgctgatcgacccggtcagccacggcggtgatgggccg
acagtgttggctccggtcgccgaggtgttggccaaagacgagtggattctgcattccgcc
gatcaggatctgccgtgcctggccgaggtcggcatgtacccgccagcgctgtatgacacc
gagttggccggccgcttggccggattcgaacgggtgaacctggccaccatggtcgagcgg
ctgctgggtttcgggttggccaaaggacatggtgccgctgactggtccaagcgcccgctg
ccgatcgagtggctcaactacgcggccctggacgtcgaactgctcatcgagttacgcgcg
gcgatcgctgcggtgttggccgagcaaggcaaaagtgattgggccgcacaggaattcgag
tatctgcgcaccgccattccggcggccgcccgcaaagaccgctggcggcgaacgtcgggt
atccaccgcgtccatgaccggcgcggcttggcggcagtgcgcgagctgtggaccatgcgc
gaccgcatcgcccagcgccgcgacattgcgccccgaaggatcctgcccgactccgccatc
gtcgacgccgccctcgccgatcccaagtccgtggcggatcttgtcgcgctgccggtgttc
ggcgggcgcaatcagcggcgcagcgcggcgatgtggctatcggcgctggaagcggcccgc
caaaatcagcacccaccggacgagggcgagccggccaccacgccgccaccaccggcgcgg
tggggccggcgcaaacccgaagcggccgcccggctggaggcggcgcgcgccgccctggcg
aaggtgtcgcaacgggtgaccgtgccgacggagaatctggtctcaccggatctggtgcga
cggctgtgttgggactgggactcggtgcacgacggcgacgccgaacaggcggtggccgag
tacttgcgggccggtcaagcgcgaccgtggcaacgcgaactcgtggtgtcgccgttggcc
acggcgctatcgcaggccgccaatgtcgccaccgatgttcccaccgacgactag
DBGET
integrated database retrieval system
