Mycobacterium kubicae: I2456_11650
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Entry
I2456_11650 CDS
T07774
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mku
Mycobacterium kubicae
Pathway
mku03030
DNA replication
mku03430
Mismatch repair
mku03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mku00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I2456_11650 (dnaE)
03430 Mismatch repair
I2456_11650 (dnaE)
03440 Homologous recombination
I2456_11650 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mku03032
]
I2456_11650 (dnaE)
03400 DNA repair and recombination proteins [BR:
mku03400
]
I2456_11650 (dnaE)
Enzymes [BR:
mku01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I2456_11650 (dnaE)
DNA replication proteins [BR:
mku03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I2456_11650 (dnaE)
DNA repair and recombination proteins [BR:
mku03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I2456_11650 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
MCM10_OB
Motif
Other DBs
NCBI-ProteinID:
QPI40032
UniProt:
A0AAX1JI06
LinkDB
All DBs
Position
2456144..2459677
Genome browser
AA seq
1177 aa
AA seq
DB search
MNQSSFVHLHNHTEYSMLDGAAKITPMLAEVERLGMPAVGMTDHGNMFGASEFYNTATKA
GIKPIIGVEAYIAPGSRFDTRRITWGDPSQKGDDVSGSGSYTHLTMVAENATGLRNLFKL
SSLASFEGQLGKWSRMDAELVAEHAEGIIATTGCPSGEVQTRLRLGHHREALESAAKWRE
IFGAENYFLELMDHGLSIEQRVREGLLEIGRKLNIPPLATNDCHYVTRDAAHNHEALLCV
QTGKTLSDPNRFKFDGDGYYLKSAADMRKLWDDQVPGACDSTLLIAERVQSYADVWTPRD
RMPIFPVPDGHDQASWLHHEVMAGLQRRFPGGVGQDYIDRAEYEIKVICDKGFPAYFLIV
ADLINHAKSVDIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSAPDIDI
DFDDRRRGEMVRYAAEKWGHDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRITKA
LPPPIMAKDIPLSGITDPAHERYKEAAEVRSLIETDPDVRTIYQTARGLEGLIRNAGVHA
CAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDAIENI
RANRGIDLDLESVPLDDAPTYELLGRGDTLGVFQLDGGPMRDLLRRMQPTEFNDIVAVLA
LYRPGPMGMNAHNDYADRKNNRQPIKPIHPELEEPLREILSETYGLIVYQEQIMFIAQKV
ASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSDKAVKALWDTILPFAGYAFN
KSHAAGYGLVSYWTAYLKANYPSEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPPDVN
ESVQNFASVGNDIRFGLGAVRNVGANVVGSLIQTRSDKGKFTDFSDYLNKIDISACNKKV
TESLIKAGAFDSLGHARKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGSDAGTESVFTIK
VPEDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTAIPAILDGDVPNDTQVRVG
GILASVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSNYGAEIADDVVVLVNAKVAIR
DDRVSLIANELVVPDFSTAQVNRPLAVSLPTRQCTLDKVSALKQVLTRHPGTSQVHLRLI
SGDRITTLELDQSLRVTPSPALMGDLKALLGPGCLGG
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagtcatccttcgtgcacctgcataaccacaccgagtattcgatgctcgacggt
gccgcgaagatcacgccgatgctggccgaggtggagcggctggggatgccggcggtcggg
atgaccgaccacggaaacatgttcggcgccagcgagttctacaacacagccaccaaggcg
gggatcaaaccgatcatcggcgtcgaggcctatatcgcgcccggttcccgcttcgacacc
cgtcgcatcacctggggtgaccccagccagaagggtgacgacgtctccggtagcggctcc
tacacgcacctgacgatggtggccgagaatgcgaccggcttgcgcaacctgttcaagttg
tcttcgctggcctccttcgaaggccagctcggcaagtggtcgcgcatggacgccgaactc
gtcgccgagcacgccgagggcatcatcgccaccaccggctgcccgtccggcgaggtgcag
acccggctgcggctgggacaccaccgcgaagccctggagtccgcggccaagtggcgcgag
attttcggcgccgagaactacttcctcgagctcatggaccacgggctgtcgatcgagcag
cgagtccgcgaaggtctgctggagatcggccgcaagctcaacattccgccgctggccacc
aacgactgtcactacgtcacccgcgacgccgcccacaaccacgaggcgctgctgtgcgtg
cagaccggaaagacactgtcggatcccaaccggttcaagttcgacggcgacggctactac
ctcaagtccgccgccgacatgcgcaagctctgggatgaccaggtgcccggcgcctgcgac
tcgaccctgttgatcgccgagcgggtgcagtcctacgccgacgtgtggactccgcgcgat
cgaatgccgatattccccgttcccgacggccacgaccaagcctcctggttgcaccacgag
gtgatggccgggctgcaacgacgctttccgggcggggtcggtcaggactacatcgaccgg
gccgagtacgagatcaaggtcatctgcgacaagggttttcccgcgtacttcctgatcgtc
gccgacctgatcaaccacgccaagtcggtcgatatccgggtcggcccgggccgtggatcg
gcggcaggttcgctggtggcctacgcgctgggcatcaccaacatcgaccccatcccgcac
gggctgctgttcgagcgcttcctcaaccccgagcgcccgtcggcacccgacatcgacatc
gacttcgacgaccgtcgtcgtggtgagatggtgcgctatgccgccgagaagtgggggcac
gaccgggtcgcccaggtcatcactttcggcacgatcaaaactaaagccgcactcaaggat
tcggcccgcatccactacgggcagcccggcttcgcgatcgccgaccggatcaccaaggcg
ctgccaccgccgatcatggccaaagacattccgctgtcgggtatcaccgaccccgcccac
gagcggtacaaggaagccgccgaggtccgcagcctgatcgaaaccgaccccgacgtgcgc
accatctaccagacggcgcgggggctggaagggctgatccgcaacgccggtgtgcacgcg
tgcgcggtgatcatgagcagtgagccgctgactgaggccatcccgctgtggaaacggccc
caggacggcgcaatcatcaccggctgggactacccgtcgtgcgaggccatcggcctgctg
aagatggacttccttggcctgcgcaacctgaccatcatcggcgacgcgatcgagaacatc
agggccaacaggggcatcgacctcgacctggaatcggtgccactcgacgacgcgccgacc
tacgaattgctgggtcgcggcgacaccctgggtgtgttccaactcgacggcgggccgatg
cgggatctgttgcgccgcatgcagcccaccgagttcaacgacatcgtcgcggtccttgcg
ctctaccggcccggaccgatgggcatgaacgcgcacaacgactacgccgaccgcaagaac
aaccgccagccgatcaagccgatccaccccgaactcgaagaaccgctgcgcgagatcctc
tccgagacatacggattgatcgtctaccaagagcagatcatgttcatcgcgcaaaaggtc
gcctcctacaccatgggcaaggccgatgcgctgcgtaaggccatgggcaagaagaagctc
gaggtgctcgaggccgagtacaagggcttctacgaaggcatgaccgccaacggtttctcc
gacaaagcggtgaaagcgctgtgggacaccattcttccgttcgccggatacgcgttcaac
aagtcgcacgcggccggctacgggctggtgtcctactggacggcgtacctgaaagcgaat
taccccagcgagtacatggccggcctgctgacctcggtaggcgacgacaaagacaaggcc
gcggtatacctcgcggactgccgcaagctcggcatcaccgtgttgccccccgacgtcaac
gagtcggtgcagaacttcgcctcggtgggcaacgacatccggttcggcttgggcgcggtg
cgcaacgtcggcgctaacgtcgtcggttcgttgatccaaacccggagcgacaaaggcaag
ttcaccgacttctccgactacctcaacaagatcgacatctcggcctgcaacaagaaggtc
acggagtcgctcatcaaagccggtgcgttcgattccctggggcatgcccgcaagggcctg
ttcctggtgcacaccgacgccgtcgacagcgtgctcggcacgaagaaggccgaggcgatg
gggcagttcgacctgttcggcggctccgatgccggcaccgagtcggtcttcaccatcaag
gtccccgaggacgagtgggaggacaaacacaagctcgccctggaacgcgagatgcttggg
ttgtacgtatccggtcatccgctcaacggcgtggcgcacctgctggccgcccaggtcgac
accgccatcccggcgattctggacggggacgtgcccaacgacacccaagtgcgcgtcggc
ggcatcctggcgtcggtgaaccggcgcgtcaacaagaacgggatgccgtgggcgtcagcg
caattggaagacctgaccggtggcatcgaggtgatgttctttccgcacacctactccaac
tacggtgcggagatcgccgatgacgtcgtagtgctggtcaacgcgaaggtggcgatccgc
gatgaccgggtctcgctgattgccaacgaactcgtggtgcccgacttctccaccgcccag
gtcaaccgcccactggcggtcagtctgccgactcggcaatgcacgttggacaaggtgagc
gcgctcaagcaggtgctgacccgtcatcccggtacctcgcaggtccatctgcggttgata
agcggcgaccggataaccacgctggagctggaccagtccttgcgggtgacgccctcgccc
gcattgatgggtgacctcaaagcgctgctggggccgggctgtttaggcggttga
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