Mycobacterium kubicae: I2456_12035
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Entry
I2456_12035 CDS
T07774
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mku
Mycobacterium kubicae
Pathway
mku03030
DNA replication
mku03410
Base excision repair
mku03420
Nucleotide excision repair
mku03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mku00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I2456_12035 (polA)
03410 Base excision repair
I2456_12035 (polA)
03420 Nucleotide excision repair
I2456_12035 (polA)
03440 Homologous recombination
I2456_12035 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mku03032
]
I2456_12035 (polA)
03400 DNA repair and recombination proteins [BR:
mku03400
]
I2456_12035 (polA)
Enzymes [BR:
mku01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I2456_12035 (polA)
DNA replication proteins [BR:
mku03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
I2456_12035 (polA)
DNA repair and recombination proteins [BR:
mku03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
I2456_12035 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I2456_12035 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
NYN_YacP
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
QPI40685
UniProt:
A0AAX1JGJ2
LinkDB
All DBs
Position
2536321..2538984
Genome browser
AA seq
887 aa
AA seq
DB search
MLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAPSHIAAAFDVSRQ
TFRSERYPEYKANRSATPDEFHGQIDITKEVLNALGITVLSEPGFEADDLIATLATQAEH
EGYRVLVVTGDRDSLQLVSEDVTVLYPRKGVSELTRFTPEAVVEKYGLTPKQYPDFAALR
GDPSDNLPGIPGVGEKTASKWIIEYGSLQSLVDNVDSVRGKVGDALRAHLANVIRNRDLT
ELIRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFETLAAVEPEVDEGFDVRG
GALEPGTVAQWLAEHAGDGRRSGLTVVGTHLPHGGDATALAIAAADGDGAYIDTATLTPE
DDQALGDWLSDPAKPKALHEAKLAIHDVAGRGWTLNGITSDTALAAYLVRPGQRSFALDD
LSLRYLRRELRADSPEQQQLSLLDDMDGVDDQAVQTAILRARAVIDLADALDAELARIDS
TALLGDMELPVLRALADMEAHGIAVDLPMLTELQSQFADQIRDAAEAAYAVIGKQINLGS
PKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFDKTGHPFLQHLLAHRDVSRLKVTVD
GLLNSVAGDGRIHTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRQIRDAFIVGKGYAELM
TADYSQIEMRIMAHLSRDEGLIEAFNTGEDLHSFVASRAFGVPIEEVTAELRRRVKAMSY
GLAYGLSAYGLAAQLNISTEEAKVQMDQYFARFGGIRDYLFAVVEQARKDGYTSTVLGRR
RYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMIEVDKAIKEAGLASRMLLQVHD
ELLFEIAPGEREQVEALAREKMGGAYPLDVPLEVSVGYGRSWDAAAH
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgttgctggacggcaattcgctggcgtttcgggcgttctatgcgctgcccgcggaaaac
ttcaagacccgcggtgggctgaccaccaacgcggtctacggcttcaccgccatgctgatc
aacctgctgcgcgacgaagcaccctcgcacatcgcggcggcattcgacgtgtcgcggcag
acgtttcgctccgagcgctaccccgaatacaaggccaaccggtccgcgacgcccgacgag
ttccacgggcagatcgacatcaccaaggaagtgctcaacgcgctgggcatcaccgtgctg
tccgagcccgggttcgaggccgacgacctcatcgccaccttggccacccaagccgagcat
gagggctaccgcgtgctggtggtcaccggcgaccgcgactcgctgcaactggtctccgag
gacgtgacggtgctctacccgcgtaaaggcgtcagcgagctcacccgattcacccccgaa
gccgtcgtggagaaatacgggctcaccccgaagcaatacccggacttcgccgcgctgcgc
ggcgaccccagcgacaaccttccgggcatcccgggagtgggggagaagaccgcctcgaag
tggatcatcgagtacggctccctgcaatcactggtcgacaatgtcgattcggtgcgcggc
aaggtgggcgatgcgttgcgcgcgcacctggccaacgtgatccgtaaccgcgacctgacg
gaactgatccgcgatgtaccgctggcccagacgccggacacgctgcggctacagccctgg
gaccgcgaccacatccaccgcctgttcgacgacctggagttccgggtgctgcgcgaccgg
ctgttcgagacgttggccgccgtcgaacccgaagtcgacgagggcttcgacgtgcgcggc
ggcgcgctggaacctggcacggtcgcgcagtggctggccgagcacgccggcgacgggcgc
cgctccggcctgaccgtggtgggcacccacctgccccacggtggggacgccaccgcgctg
gcgatcgccgccgccgacggcgacggtgcctacatcgacaccgccaccctgactcccgag
gacgaccaagcactcggcgactggctgtccgaccccgccaagcccaaggccctacacgag
gccaagttggccatccacgacgtggcgggccgcggctggaccttgaacggcatcacctcc
gacaccgcactggcggcttatctggtgcggccgggccagcgcagtttcgccctcgatgat
ttgtcgctgcgctaccttcgccgcgagctccgcgcggattcacctgaacagcaacaactt
tcgttactcgacgatatggacggggtggacgatcaggccgtccagaccgccattctgcgg
gctcgggccgtcatcgatcttgccgatgcgctggacgccgagttggcccgcatcgactcc
accgcactgctgggggacatggagctgccggtgctgcgggcgctggccgacatggaagct
cacgggatcgccgtcgatctgcccatgctcaccgaactgcaaagccagttcgccgatcag
atccgcgacgcggccgaggccgcttatgcggtgatcggcaagcagatcaatctcggctcg
cccaaacagctgcaggtagtgctgttcgacgaactcggcatgccgaaaaccaagcgcacc
aaaaccggttacaccaccgacgccgacgcgttgcagtcactgttcgacaagaccgggcac
ccattcctgcagcatctgctggcccaccgcgacgtcagccggctcaaagtcaccgtcgac
ggtttgctgaactcggtagccggcgacggccgcatccacaccacgttcaaccagacgatc
gccgcgaccgggcggttgtcgtccaccgaaccgaacttgcagaacatcccaatccgcacc
gacgccggccggcagatccgcgacgcgttcatcgtcggcaaaggctacgccgagctgatg
accgcggactacagccagatcgagatgcgcatcatggcgcatctgtccagagacgaaggc
ttgatcgaggcgttcaacaccggggaggacctgcactcgttcgtggcatcccgagccttc
ggtgtcccgatcgaagaggtgaccgccgaactgcgccgccgggtcaaggcgatgtcgtac
gggctggcctatgggctgagcgcctacggcttggccgcgcagctgaacatctccaccgag
gaggcgaaggtgcagatggaccagtacttcgcccggttcggcgggattcgggactacctg
ttcgcggtggtggagcaggcccgcaaggacggctacacctccaccgtcctgggccgtcgc
cgctacctcccggaactggacagcagcaatcggcaggtccgcgaggccgccgaacgtgcc
gcgctcaacgcgccgattcagggcagcgccgccgacatcatcaaagtcgcgatgatcgag
gtcgacaaggccatcaaagaagcgggcctggcctcacgcatgctgctgcaggtgcacgac
gagctgttgttcgaaatcgcccccggcgagcgcgagcaggtcgaggcgctggcccgcgaa
aagatgggcggcgcttacccgctggacgtcccgctggaggtgtcggtggggtacggccgt
tcgtgggacgccgcggcgcactaa
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