Mycobacterium kubicae: I2456_15610
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Entry
I2456_15610 CDS
T07774
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mku
Mycobacterium kubicae
Pathway
mku03030
DNA replication
mku03430
Mismatch repair
mku03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mku00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I2456_15610
03430 Mismatch repair
I2456_15610
03440 Homologous recombination
I2456_15610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mku03032
]
I2456_15610
03400 DNA repair and recombination proteins [BR:
mku03400
]
I2456_15610
Enzymes [BR:
mku01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I2456_15610
DNA replication proteins [BR:
mku03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I2456_15610
DNA repair and recombination proteins [BR:
mku03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I2456_15610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
DUF7508
UVR
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
QPI36004
UniProt:
A0AAX1J3H4
LinkDB
All DBs
Position
3317270..3319219
Genome browser
AA seq
649 aa
AA seq
DB search
MRMPNVTAMGVTGATQLSFAQVDGWDGAAEQSLHDTTFVVVDLETTGGRASGTDAAAADA
ITEIGAVKVRGGAVLGEFATLVDPQRSIPPQIVQLTGITTAMVCDAPTIDAVLPMFLEFA
GDAILVAHNAGFDIGFLRAAAQRCNIAWPRPRVLCTVRLARRVLSREEAPSVRLASLAKL
FAVTTQPTHRALDDARATVDVLHALIERVGNQGVHTYADLRAYLPDVTPAQRRKRVLAER
LPRRPGVYLFRGPSGEVLYVGTAVDLRRRVNQYFNGSDPRGRMKEMVALASAVDHVECAH
ALEAGVRELRLLAAHAPPYNRRSKFPHRWWWVVLSDEAFPRLSVVRNPRHDRVIGPFRSR
ADAADTAALLARYTGIRTCTKRLGRSALHGPDCPRVEVSPCPAARDVTPTQYAAATVRAL
ALTDGADNAALAAAVEQVNQLAERRHYESAARLRDHIATAIEMLWRGQRLRALARLPELI
AAAPDGSGGYHLAVVRHGQLAAAGAAGRGVPPMPVVEAITAGAQTVLPTPAPLGGALVEE
TALVTRWLTTPGVRIVRVTGDESDDGWCSPLRSAGPWAAWAASARSARIAAEQAVDSRTS
RVGRGSGHSDLLAEPHPSREQVFGRPAVDGRGGPPQPVLPRRQPFSAAG
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcatgcctaacgtcaccgccatgggcgtgaccggtgcgactcagctgagcttcgcg
caggtggacggctgggacggcgccgcggaacagtcgctgcacgacaccaccttcgtcgtg
gtggacctggagaccaccggcggccgcgcgagcggcaccgacgccgccgcggccgacgcc
atcaccgagatcggcgcggtcaaggtgcgcggcggggcggtcctgggtgaattcgccacc
ctggtcgacccgcaacgcagcatcccgccccagatcgtccaactgaccggcatcaccacg
gcaatggtgtgtgacgcgcccacgatcgatgcggtcctgccgatgtttctcgagttcgcc
ggtgacgccatcctggtcgcgcacaacgccggcttcgacatcggattcctgcgcgccgcg
gcccaacggtgcaacatcgcctggccccggccacgggtgttgtgcacggttcggctggcg
cggcgggtgttgagccgggaagaggcgcccagcgtgcggctggcgtcgctggccaagctg
ttcgccgtcactacccagcccacccaccgggcactggacgacgctcgcgcgaccgtcgac
gtattgcacgcactcatcgagcgagtgggcaaccagggcgtgcacacctatgccgacctg
cgcgcctacctgcccgacgtcaccccggcccagcggcgcaagcgggtgctcgccgagcgc
ctgccgcggcggccgggggtgtatctgttccgcggaccgtccggtgaagtgctgtacgtc
ggaaccgcggtggacctgcgccggcgggtgaaccagtacttcaacggcagcgatccgcgg
ggccggatgaaggagatggtcgccctggccagcgccgtcgaccatgtcgaatgcgcccat
gcgctggaagcaggcgtgcgggagctgcggctgctggccgcccacgccccgccctacaac
cgccggtcgaaatttccgcaccggtggtggtgggtggtgctcagcgacgaggcgttcccg
cggctgtcggtggtccgcaatccccgccacgaccgagtcatcggcccgtttcgctcgcgc
gccgacgccgcggacaccgcggcgctgctggcccggtacaccggcatccgcacctgcacc
aagcgcctggggcgttcggcgctgcacggaccggactgcccgcgggtcgaagtgtcaccc
tgcccggcggcccgcgatgtgacccccacccagtacgccgccgcgacggtgcgggcgctg
gcgttgaccgacggagccgacaacgccgcgctcgcggcggccgtcgagcaggtcaatcaa
ctggccgagcgccgacactacgaaagcgcggcacggctgcgcgaccacatcgccaccgcc
atcgagatgctgtggcgcggccagcgcctgcgcgcgctggcgcggctgcccgagttgatc
gccgcggccccggacggtagcggcggctatcacctcgccgtcgtccgccacggtcaactc
gccgcggccggcgccgccgggcgcggagtaccgccgatgccggtggtcgaggcgatcacg
gcgggggcgcagacggtgctgccgaccccggcaccactgggcggcgcgctggtcgaggaa
accgcgctggtcacccgctggctgacgacgccgggtgtgcgcatcgtgcgggtcaccggc
gacgagtccgacgacggttggtgttcaccgctgcggtcggcaggcccgtgggccgcgtgg
gcggcctcggcgcgatcggcgcggatcgccgccgagcaggccgttgatagtcgaactagc
cgagtaggccggggcagcgggcactcagacctgctggccgaaccgcacccatcgcgcgag
caggtgttcggccgccccgctgtcgatggccgcggcggcccgccgcagcccgtcctccca
cgccggcagccattcagcgcggctggatag
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