Mycobacterium kubicae: I2456_18215
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Entry
I2456_18215 CDS
T07774
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mku
Mycobacterium kubicae
Pathway
mku03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mku00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I2456_18215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mku03019
]
I2456_18215
03009 Ribosome biogenesis [BR:
mku03009
]
I2456_18215
Enzymes [BR:
mku01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
I2456_18215
Messenger RNA biogenesis [BR:
mku03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
I2456_18215
Ribosome biogenesis [BR:
mku03009
]
Prokaryotic type
rRNA processing factors
I2456_18215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
PCB_OB
IF2_N
Osmo_MPGsynth
Motif
Other DBs
NCBI-ProteinID:
QPI36421
UniProt:
A0AAX1J589
LinkDB
All DBs
Position
complement(3875500..3878490)
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AA seq
996 aa
AA seq
DB search
MVDGAPPSDSANEPTQRQDLPDRLRVHSLARTLGTTSRRVLDALTALDGRIRSAHSSVDH
VDAVRVRDLLAAQPSDSSDADTAPSPAADPPDEPESRLMLETAVERPHYMPLFVAPQPVT
APVDDDSADDDSDDDSGDDPGDDAEGQDGDDDDEQADRPAGKRRRRGRRGRGRGRGEQGG
PDGQSEGQGTDNGDGEKRAADGVDSDAGSDATDGQDSDDSDDSDDSDDTGDDENGSADAG
SRRRRRRRRRKTGSADDNEDGPAPDDPPNTVVHERPPRNGKSGGGDDSGGNEIKGIDGST
RLEAKRQRRRDGRDAGRRRPPVLTEAEFLARREAVERVMVVRDRVRTEPPHPGARYTQIA
VLEDGIVVEHFVTSAASASLVGNIYLGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWEA
AGLGGTDRKIEQALKPGDYVVVQVSKDPVGHKGARLTTQVSLAGRYLVYVPGASSTGISR
KLPDTERQRLKEILREVVPSDAGVIIRTASEGVKEDDIRGDVTRLQERWKQIEAKAAEIK
QKAAGAAVALYEEPDVLVKVIRDLFNEDFAGLVVSGDEAWTTINDYVNSVAPDLVSKLTK
YEPAVGPEGQTGPDVFAVHRIDEQLAKAMDRKVWLPSGGTLVIDRTEAMTVIDVNTGKFT
GAGGNLEQTVTKNNLEAAEEIVRQLRLRDIGGIVVIDFIDMVLESNRDLVLRRLTEALAR
DRTRHQVSEVTSLGLVQLTRKRLGTGLIEAFSSSCPNCGGRGILLHADPVDSAPSTGRKS
ETGNRRNRRSKKNRAEEPADKGVVAKVPAHAPGEHPMFKAMAAAADRDDDEESGDSDEEL
TAETDEQTQPRAAADLEDTEDSDFDDTEDSEDDSDDDTDEDEDDDADELDDEDEDLDELE
DEDIDDDDEDDDADDDEDAEDEDDIDELDSVSDAEDDDSQSDDASDHAHADDQGADEDTD
AGQEPLASAVPVSSAGGRPRRRRAAGRPAGPPIHPD
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
gtggtagacggtgccccaccatcagactcagcaaatgaaccgacacagcgacaggacctg
ccggaccggctaagagtccactcgctggcccggacgctgggcaccaccagcagacgggtg
ctcgacgcgctgaccgcgctcgacggccggatccgcagcgcccactccagcgtcgaccac
gtcgacgcggtccgggtccgggatctgctggccgcccagccctccgactcgtccgacgcc
gacaccgcgcccagccccgccgcggatccgccggacgagccggaatcccggctgatgctc
gagaccgcggtcgagcggccgcactacatgccgttgttcgtcgcaccccaacccgtgacc
gcgccggtcgacgacgactcggccgacgacgattccgacgacgactccggtgacgacccc
ggtgacgacgcagagggccaggacggcgacgacgacgacgaacaggccgaccggccggcc
ggcaagcggcggcgtcggggccggcgcggccggggtcgcggccgcggcgagcaaggcgga
cccgatggccagtccgaaggccagggcacggacaacggcgatggtgaaaagcgtgccgcc
gacggtgtcgactctgatgccggctctgatgccaccgatggccaagattccgacgactcc
gacgactcggacgactccgacgacactggcgacgacgagaacggttcagccgacgccggc
agccgacgccgtcgccgtcggcggcggcggaaaacgggctccgctgacgacaacgaggac
ggtccggcgccggatgacccgcctaacaccgtcgtgcacgagcggcccccacgcaacggc
aaatccggaggcggtgacgactccgggggcaacgagatcaagggcatcgacggctcgact
cgtctggaggccaaacgacagcgtcgccgcgacgggcgtgacgccggccggcgccgcccg
ccggtactgaccgaagccgaattcctcgcgcgccgcgaggccgtcgaacgggtcatggtg
gtgcgcgaccgggtccgcaccgagccgccgcacccgggtgcgcgctacacccagatagcg
gtcctggaagacggcatcgtcgtcgaacacttcgtcacctcggcagcctcggcctcgctg
gtcggcaacatctacctgggcatcgtccaaaatgtgttgccgtccatggaagcggcattc
gtcgacatcggtcgcggccgcaacggtgtcctgtacgccggcgaagtcaactgggaggcc
gccggactcggcggtaccgaccgcaagatcgaacaagccctcaaacccggcgactacgtc
gtcgtgcaggtcagcaaggacccggtcgggcacaagggcgcccggctgaccacgcaggtc
tcgctggccggtcgctacctggtctatgtgcccggcgcgtcgtccaccggcatcagccgc
aagctgcccgacaccgaacgccagcggctcaaagagatcctgcgtgaggtggtgccgtcg
gacgccggcgtcatcatccgcacggcgtccgaaggcgtcaaagaggacgacatccgcggt
gacgtcacgcggctacaggaacgctggaagcagatcgaggccaaggcggccgaaatcaag
cagaaggcagcaggcgccgcggtggcgctctacgaagagcccgatgtgctggtcaaggtc
atccgcgacctgttcaacgaggacttcgccggtctggtggtgtccggcgacgaggcgtgg
acgacgatcaatgactacgtgaattctgttgcgccggaccttgtttcgaagctgacgaag
tacgagcctgcggtcgggccggaaggacagaccgggccggacgtgttcgcggtgcaccgc
atcgacgagcaactcgccaaggcgatggaccggaaagtgtggctgccgtcgggcggcacg
ctggtgatcgaccgcaccgaggccatgacggtcatcgacgtcaacaccgggaagttcacc
ggcgccggcggcaatctggagcagacggtcaccaagaacaacctcgaggcggccgaggag
atcgtgcgtcagctgcggctgcgtgacatcggcggcatcgtggtcatcgacttcatcgac
atggtgctcgaatccaaccgcgacctggtgttgcgccggctcaccgaggcgctggcccgg
gaccgcacccgccaccaggtctccgaggtgacgtcgctgggcttggtgcagctgacccgc
aagcggttgggcaccggattgatcgaggcgttctcctcctcctgcccgaactgcgggggc
cgcggcatcctgctgcacgccgacccggttgattcggcgccgtcgaccggtcgcaagtcc
gagaccggcaatcgccgcaaccggcggtcgaagaagaaccgcgccgaagaacccgctgac
aagggcgtggtcgccaaggtcccggcgcacgctccgggcgaacatccgatgttcaaggcg
atggccgccgcggccgatcgggatgacgacgaggaatccggtgactccgacgaggaactc
accgccgagaccgacgagcagacccaaccgcgggccgcggccgacctcgaggacaccgaa
gacagcgacttcgacgacaccgaggacagcgaagacgactcggacgacgacaccgacgaa
gacgaagacgacgacgccgacgaactcgacgacgaggacgaggacctcgacgaactcgaa
gacgaggacatcgacgacgacgacgaggacgacgacgccgacgacgacgaagacgcagag
gacgaggacgacatcgacgaactcgactccgtctccgacgccgaagacgacgactcgcag
tccgacgacgcaagcgaccacgcacacgccgacgaccaaggcgccgacgaagacaccgac
gcggggcaggaaccgctcgcttcggcggtgcccgtcagctcggccggcggccgtccgcgg
cgccgacgcgcggcgggccgccccgcggggccgccgatccacccggactaa
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