Mycobacterium kubicae: I2456_19300
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Entry
I2456_19300 CDS
T07774
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
mku
Mycobacterium kubicae
Pathway
mku03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mku00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
I2456_19300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mku03000
]
I2456_19300
03400 DNA repair and recombination proteins [BR:
mku03400
]
I2456_19300
Enzymes [BR:
mku01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
I2456_19300
Transcription factors [BR:
mku03000
]
Prokaryotic type
Helix-turn-helix
AraC family
I2456_19300
DNA repair and recombination proteins [BR:
mku03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
I2456_19300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
DUF6233
Motif
Other DBs
NCBI-ProteinID:
QPI36608
UniProt:
A0AAX1J837
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All DBs
Position
4121849..4123351
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AA seq
500 aa
AA seq
DB search
MYDDFERCYRAVQAKDARFDGWFVIAVLTTRIYCRPSCPVRPPFARNVRFLPTAAAAQRE
GFRACKRCRPDASPGSPEWNVRGDVVARAMRLIADGTVDRDGVTGLAAHLGYTTRQLERL
LQAEVGAGPLALARAQRMQTARVLIETTDLPFGDVAFAAGFSSIRQFNDTVRLVCDSTPT
ALRKRATTRFGSHGAHSPGTLSLRLPVRAPFAYEGLFGHLAASAVPGCEEVRDGAYRRTL
RLASGTGLVTLTPASDHVRCLLVLDDLRDLAAATARCRRLLDLDADPEAVVEALSRDPDL
APVVAKAPGQRIPRTVDEAELAVRAVLGQQVSTKAARTHAARLVLAYGQPVRDPAGGLTH
TFPSVEQLAEIDPVHLAVPKARQRTLSALVGAVADGTVELHPGCDWDRARSQLLFLPGIG
PWTAEVIAMRGLGDPDAFPASDLGLKSAAEQLGLPPSERALIEHSARWRPWRSYATQHLW
TTLDHPVNQWPPQQPSKEIA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
gtgtacgacgacttcgagcgctgctaccgagcggttcaggccaaggacgcccggttcgac
ggctggttcgtgatcgcggtcctgaccacccgcatctactgtcggcccagttgtccagtg
cggccgcccttcgcccgcaacgtacggttcctgccgaccgcagccgccgcgcagcgggag
ggcttccgagcgtgcaaacgctgccggccggacgcgtcaccgggctcacccgaatggaat
gtgcggggtgacgtcgtagcccgcgccatgcggctcatcgccgacggaacggtggaccgc
gacggtgtgaccggcctggccgcccacctgggctacaccacacgccagttggagcggttg
ctgcaagccgaagttggcgccggccccctggccttggcgcgcgcgcagcgcatgcagacc
gcgcgggtgctcatcgagaccaccgacttgccgtttggcgatgttgccttcgcggcgggc
ttttccagcatccgccagttcaacgacaccgtgcgactggtgtgcgacagcactcccacg
gccctgcgcaaacgagccacgacacgattcggatcccacggtgcgcattccccggggacg
ctgtcgttgcggttgccggtgcgtgcgcccttcgcctacgagggcctgttcggtcacctg
gccgctagcgcggtgcccggctgcgaagaggtccgcgacggcgcgtaccgacgcacgctg
cggctggcttcgggcaccggactggtcacgttgacaccggcctccgaccatgtgcgttgc
ctgctggtactcgacgatctgcgcgacctcgcggccgctaccgcccgctgccggcgattg
ctggatctcgacgccgatcccgaagcggtggtcgaggcgctcagccgcgaccccgacctg
gcgccggtagtggccaaggcgcccgggcagcgcattccccggaccgtcgacgaggccgaa
ctcgccgtgcgagcagtgctgggccagcaggtgtcgaccaaggccgcccgcacgcatgcg
gctcgcctcgtcctggcctacggccagcccgtgcgcgatcccgccggcgggctgacccac
accttcccctctgtcgagcagttggccgagatcgatccggtgcacctcgcggtgcccaag
gcgcgacagcggacgttgagcgcgctggtcggcgccgtcgccgacggcaccgtcgaactg
caccccggatgcgactgggaccgtgcgcgcagtcaattgcttttcttgccgggcatcgga
ccatggacggcagaggtgatcgcgatgcgtggcctcggcgatccggacgcgttcccggcc
agcgatctcggcctcaaatcggcggccgaacagctgggcctgccgcctagcgaacgggca
ttgatcgagcacagcgcccgctggcgaccgtggcgctcctatgccacccaacacctttgg
accaccctcgatcatccggtgaaccaatggccgccacagcagccatcgaaggagattgca
tga
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