Mycobacterium kubicae: I2456_19410
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Entry
I2456_19410 CDS
T07774
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mku
Mycobacterium kubicae
Pathway
mku03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mku00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I2456_19410 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mku03021
]
I2456_19410 (rho)
03019 Messenger RNA biogenesis [BR:
mku03019
]
I2456_19410 (rho)
Transcription machinery [BR:
mku03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
I2456_19410 (rho)
Messenger RNA biogenesis [BR:
mku03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
I2456_19410 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
Fungal_virus_P2_C
NACHT
VWA_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QPI36627
UniProt:
A0AAX1J7Y8
LinkDB
All DBs
Position
complement(4144613..4146487)
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AA seq
624 aa
AA seq
DB search
MTDTDLFTAGESTDADKQSDSVITDTPVVKTGAPTGSLAAMVLPELRALASQSGVKGTSG
MRKNELIAAIKEIRGQANGTSTAQTATAPLQDTAAPPAANGTQIPDNGVAQETQKADASV
NADAPAKAEQETEAPAEPRRRERRGAAREAGSASPTTSDSPASNGTADGSKAQSDTKTEE
RPAEAGGDQNGDQQGGGQQNRGGDDDGDGRQGRRGRRFRDRRRRGERTGEGGGESELRED
DVVQPVAGILDVLDNYAFVRTSGYLAGPHDVYVSMNMVRKNGLRRGDAVTGAVRVPREGE
TGDKNPRQKFNPLVRLDSINGGSIEDAKKRPEFGKLTPLYPNQRLRLETTPDRLTTRVID
LIMPIGKGQRALIVSPPKAGKTTILQDIANAITRNNPECHLMVVLVDERPEEVTDMQRSV
KGEVISSTFDRPPSDHTQAAELAIERAKRLVEQGKDVVVLLDSITRLGRAYNNASPASGR
ILSGGVDSTALYPPKRFLGAARNIEEGGSLTIIATAMVETGSTGDTVIFEEFKGTGNAEL
KLDRKIAERRVFPAVDVNPSGTRKDELLLSPDEFGIVHKLRRVLSGLDSHQAIDLLMSQL
RKTKTNYEFLVQVSKTTPGSMDND
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
gtgactgatacggacctcttcacggctggcgaaagcaccgacgcagacaagcagtcggac
tccgtgatcacagacaccccagtcgtcaaaaccggtgcgccgacaggatcactggccgcc
atggtgctgcccgaacttcgggcgctggctagccagtccggcgtaaagggcacctctggt
atgcgcaagaacgaactcatcgccgcgatcaaggagatcaggggacaggccaacggcacg
tccaccgcccagaccgcgactgctccactccaagacaccgcggccccgcccgccgccaac
gggacccaaattcccgacaacggggtggcccaagaaacccagaaagctgacgcttcggta
aacgccgacgcgccggccaaggcggagcaggagaccgaggcaccggccgaaccgcgacgc
cgcgaacgccggggcgccgcccgcgaggcgggatcggcaagccccaccaccagcgacagc
ccagcctcgaacgggaccgctgacggctcgaaggcccagtcagacaccaagacggaggaa
cgtccggcagaggcgggcggcgaccaaaacggtgaccagcaaggcgggggccagcagaac
cgcggtggcgacgacgacggtgacggacgtcagggccggcgcggtcgccgcttccgcgac
cggcgccggcgcggcgaacgcaccggtgaaggcggcggcgaaagcgaactgcgcgaggac
gatgtcgtccagccggtagcgggcatcctcgacgttctggacaactacgcattcgtgcgc
acctccggctacctggccggcccgcacgacgtctacgtgtcgatgaacatggtgcgcaag
aacggtctgcgccgcggcgacgcggtgaccggtgccgtccgcgtgccccgagaaggagaa
acaggcgacaagaacccgcggcagaagttcaacccgctggttcgcctggacagcatcaac
ggcggatccatcgaagacgccaagaagcggcccgaattcggcaagctgactccgctgtac
cccaaccagcggctgcgtctggaaaccaccccggaccggttgaccacgcgggtcatcgac
ctgatcatgccgatcggtaagggtcagcgcgcgctgatcgtgtcgccgcccaaggccggt
aagacgacgatcctgcaggacatcgccaacgcgatcaccaggaacaacccggaatgccac
ctcatggtcgtgctcgtcgacgagcggccggaagaggtcaccgacatgcagcgctcggtc
aagggtgaggtcatctcgtccacgttcgaccggccgccgtcagaccacacccaggccgcc
gagctggccatcgagcgcgccaagcggctcgtggagcagggcaaggacgtcgtggtgctg
ctggactcgatcacccgactgggccgcgcgtacaacaacgcgtcgccggcatcgggccgc
atcctgtccggtggtgtcgattcgaccgcgctgtacccgcccaagcgcttcctgggcgcc
gcccgcaacatcgaagaaggcggatcgctgaccatcatcgccaccgcgatggtggagacc
ggttccaccggtgacacggtgatcttcgaagagttcaagggcaccggtaacgcagagctc
aagctggaccgcaagatcgccgagcgtcgggtctttcccgccgtcgacgtcaacccgtcc
ggaacccgcaaggacgagctgctgctctcgcccgacgaattcggaatcgtgcacaaactg
cgccgggtgctgtccggcctggattcgcatcaggccatcgatctgctcatgtcgcagctg
cgcaagaccaagaccaactacgaattcctggtgcaggtgtccaagacgacaccgggatcg
atggacaacgactaa
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