Mycobacterium kubicae: I2456_21745
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Entry
I2456_21745 CDS
T07774
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mku
Mycobacterium kubicae
Pathway
mku03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mku00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
I2456_21745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mku03400
]
I2456_21745
Enzymes [BR:
mku01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
I2456_21745
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
I2456_21745
DNA repair and recombination proteins [BR:
mku03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
I2456_21745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
Ribosomal_S13
NFACT_N
DUF7577
Motif
Other DBs
NCBI-ProteinID:
QPI37019
UniProt:
A0AAX1J9E1
LinkDB
All DBs
Position
complement(4667970..4668833)
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AA seq
287 aa
AA seq
DB search
MPELPEVEALVDHLRRHAVGLTVGRVDVTALSVLKTFDPPVHALHGQTVVGAQRWGKYLG
LQAGELWLITHLSRAGWLRWSDKLAAAPLRPGKGPIALRVHLGTPGDAPGFDLTEAGTQK
RLAVWLVTDPLLVPQIAALGPDALELGPDDLAQILAGNTGRIKTVITDQKVIAGIGNAYS
DEILHVARISPFATAGKLTEKQLLTLHDAMITVLTDAVSRSVGQGAATLKGEKRSGLRVH
ARTGLPCPVCGDTVREVSFADKSFQYCPTCQTGGKVLADRRMSRLLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaactccccgaggtcgaagcgctggtcgaccacctgcggcgccacgccgtcggc
ctgaccgtcggccgcgtcgatgtcaccgccctgtcggtgctgaagaccttcgatccgccg
gtccacgccctgcacggccagaccgtcgtcggggcgcagcggtggggtaagtacctgggt
ctgcaagccggtgagttgtggctgatcacccacctgtcgcgggcgggttggctgcgctgg
tcggacaagctggcggccgcgccgctgcgcccgggcaaggggccgatcgcgctgcgcgtg
cacctcggcactcccggcgatgccccgggcttcgacctgaccgaagctgggacgcagaag
cggctggcggtctggctggtcaccgatccgctcctggtcccgcaaatcgccgcgctcgga
cccgacgcgctggaactggggcccgacgacctggcccagattctggccggcaacaccggc
cgcatcaagaccgtcatcaccgatcagaaggtgatcgccggcatcggtaacgcctacagc
gacgagatcttgcatgtcgcgcgcatctcgccgttcgccacggcagggaagctgaccgaa
aaacagctgctgaccctgcacgacgcgatgatcacggtgctcaccgacgcggtcagccgg
tccgtcggtcagggggccgccaccctgaaaggcgagaagcgttccgggctgcgagtccac
gcccgcaccgggctgccctgcccggtctgcggtgacacggtgcgcgaagtgtcatttgct
gacaagtcttttcagtactgccccacctgccagaccggcgggaaagtgctggccgaccgg
cgcatgtcgcgactactcaagtag
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integrated database retrieval system
