Mycobacterium kubicae: I2456_26605
Help
Entry
I2456_26605 CDS
T07774
Name
(GenBank) DEDDh family exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mku
Mycobacterium kubicae
Pathway
mku03030
DNA replication
mku03430
Mismatch repair
mku03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mku00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I2456_26605
03430 Mismatch repair
I2456_26605
03440 Homologous recombination
I2456_26605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mku03032
]
I2456_26605
03400 DNA repair and recombination proteins [BR:
mku03400
]
I2456_26605
Enzymes [BR:
mku01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I2456_26605
DNA replication proteins [BR:
mku03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I2456_26605
DNA repair and recombination proteins [BR:
mku03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I2456_26605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
PTCB-BRCT
DNA_pol_A_exo1
DUF7398
Motif
Other DBs
NCBI-ProteinID:
QPI41009
UniProt:
A0AAX1JKK1
LinkDB
All DBs
Position
complement(5674652..5675635)
Genome browser
AA seq
327 aa
AA seq
DB search
MSWGRPAREPDEGWAVIDVETSGFRPGQARVISIAVLGLDAAGRVEQSVVSLLNPGVDPG
PTHVHGLTAAMLEDQPRFADIVGEVAQVLRGRTLVAHNVAFDYAFLAAEAELAEAELPVD
SVMCTVELARRLELGIENLRLETLAAHWGVAQERPHDAFDDARVLTGILSPALQRARERD
VWLPVYPVTRRRWPNGRVTHEELRPLKLLASRTPCPYLNPGRYVSGRPLVQGMRVALAAE
VRRTHDELVERILHAGLAYTDSVDRDTSLVVCNETVPEQGKGYHALQLGVPVVSDAQFMN
CVGSVVGGTSMEDFTDVTALDDQLALF
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgtcctggggtcggccggcgcgcgagccggacgagggatgggccgtgatcgacgtcgag
acctcgggcttcaggcccggccaggcgcgagtcatcagtattgccgtgctcgggttggac
gccgccggccgcgtcgagcagtcggtggtcagcctgctcaacccgggagtcgatcccggg
cctacgcatgtgcacgggttgactgccgccatgctggaagaccagccgcgattcgccgac
atcgtcggcgaggtcgcgcaggtgttgcgcgggcgcacgctggtcgcccacaacgtcgcc
ttcgactacgccttcctcgccgccgaagccgagttggcggaggccgaactgccggtcgac
tcggtcatgtgcaccgtcgagttggcgcgccgactcgaactcggcatcgagaacctgcgg
cttgagaccctcgccgcgcactggggggtcgcgcaggagcggccgcatgacgcgttcgac
gacgcccgcgtgttgaccggaatcctgagcccggcgctgcaacgcgcccgggaacgcgac
gtctggctgcccgtctacccggtgacccggcgccgctggcccaacggccgggtgacccac
gaggagctgcggccgctgaagttgctggcgtcgcgcacgccgtgcccgtacctcaacccg
gggcgctacgtctcgggcaggccgcttgtgcaaggcatgcgggtggcgctggcggccgaa
gtgcgccgcacccacgacgaactcgtcgagcgcatcctgcacgccggcttggcctacacc
gattccgtcgaccgcgacacgtcgctggtggtctgcaacgaaaccgtgcccgagcagggc
aagggctatcacgcgctacagctgggggtgccggtcgtttccgacgcgcagttcatgaac
tgcgtcggatccgtcgtcggcggtaccagcatggaagacttcaccgacgtcaccgcgctc
gacgatcagctcgccctgttctga
DBGET
integrated database retrieval system
