Mycobacterium kiyosense: IWGMT90018_14210
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Entry
IWGMT90018_14210 CDS
T09155
Name
(GenBank) RNA-splicing ligase RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
mky
Mycobacterium kiyosense
Brite
KEGG Orthology (KO) [BR:
mky00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mky03016
]
IWGMT90018_14210
Enzymes [BR:
mky01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
IWGMT90018_14210
Transfer RNA biogenesis [BR:
mky03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
IWGMT90018_14210
Prokaryotic type
tRNA splicing ligases
IWGMT90018_14210
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
DUF4514
Motif
Other DBs
NCBI-ProteinID:
BDB40975
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All DBs
Position
complement(1445016..1446221)
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AA seq
401 aa
AA seq
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MPERLGHKLLNFASEIAPDTVQQAQVTASMPFVHPHVALMPDAHLGKGSAVGTVIPSKGA
VIPAAVGVDIGCGMVAAKTRCTETDLVQRFDGDYRPQLAKLRQSVEDAIPLSPGNYNTSL
QRFPFTAAKHRELLELQKTLDVDLSHSPKWMQQLGSLGGGNHFIELCLDADDTVWLFLHS
GSRGVGNKIAQRHIKIALDNCSADPSITLPHRDLAYLREGTAEFDRYIQDLEWAQRFAYL
NRAEMMDRFIDAFASWMAVQPQLVETERINTHHNYTARATIDGEAVWLTRKGAIDASEGK
LGIIPGSMGTRSYIVCGKGNADGLWSAPHGAGRRFSRTKAKKLFTEQDLADAMTGIEYRH
GKEWIDEIPQAYKDIDQVMADAEPLVEVVTSLRQVMSVKGQ
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacgcctcgggcacaagctgctcaacttcgcctccgagatcgcccccgacact
gtgcagcaggcccaagtcaccgcatcgatgccgttcgtgcacccgcacgtcgcattgatg
cccgacgcgcacctcggcaagggctcggctgtcggcaccgtcatccccagcaagggcgcg
gtcatccccgcggcggtcggggtcgatatcggctgcggcatggtcgccgccaagacccgc
tgcaccgaaacagacctggtgcaaaggttcgacggcgactaccgcccccaacttgcgaag
ttgcgtcagtcggtagaggacgcgataccgttgtcgccgggcaattacaacacgagcctg
caacgtttcccgttcaccgccgccaagcaccgggaactgctcgagttgcagaagactctc
gacgtggacctgtcgcacagcccaaagtggatgcagcagttgggatctctgggcggcggc
aaccacttcatcgaactgtgcctggacgccgacgacaccgtctggctctttctacacagc
ggctcacgcggggtcggcaacaagattgcgcagcgtcacatcaagatcgccctggacaac
tgctcagccgatccgtcgatcacgttgccgcaccgcgacctcgcctacctgcgggagggt
acggccgaattcgaccgctacatccaggatttggagtgggcacaacgtttcgcctacctc
aaccgcgccgagatgatggatcgattcatcgacgcctttgcctcatggatggcggtccaa
ccgcagctggtggaaaccgagcgcatcaacacccaccacaactacaccgcgagagcgact
atcgacggcgaagccgtctggctcacccgcaagggcgcgatcgacgccagcgaaggcaag
ctgggcatcatccccggctcgatgggcacccgctcatacatcgtgtgcggcaagggaaac
gccgatgggctgtggtcggccccgcacggggcaggtcggcggttcagccggacgaaggcc
aagaaattgttcaccgagcaggacctggccgacgccatgacggggatcgagtaccgccac
ggaaaggagtggatcgatgaaattccgcaggcgtacaaggacattgaccaagtcatggcc
gacgccgagccgctggtcgaggtggtgacttcgctgcggcaggtgatgagcgtcaagggc
cagtaa
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