Mycobacterium kiyosense: IWGMT90018_23540
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Entry
IWGMT90018_23540 CDS
T09155
Name
(GenBank) hypothetical protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mky
Mycobacterium kiyosense
Pathway
mky03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mky00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IWGMT90018_23540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mky03019
]
IWGMT90018_23540
03400 DNA repair and recombination proteins [BR:
mky03400
]
IWGMT90018_23540
Enzymes [BR:
mky01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IWGMT90018_23540
Messenger RNA biogenesis [BR:
mky03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IWGMT90018_23540
DNA repair and recombination proteins [BR:
mky03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IWGMT90018_23540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
DUF4423
Motif
Other DBs
NCBI-ProteinID:
BDB41908
LinkDB
All DBs
Position
complement(2392505..2395195)
Genome browser
AA seq
896 aa
AA seq
DB search
MPFGPNPPNLPNGGVELLVQGEQGRSQIAQRFKAEPGTVLYGLKSYWEGFDAPGETLSYL
FIEKPPYPHPDDPLVSARQRAIAERGDDPFLDYVLPLTAMQFTQGFGRLIRSETDRGAAL
VCDRRLHSPTQAQRVLLGSLPDPTIHEAVDRDDAWTRAIEFVTGAAPDLTAAISFGRDDV
SQLLESLRLVEGEDPVPKFIEAAEKLFGITDLHAKQLEVMCAIAAGNDVLAVLPTGFGKS
VCFQLPALLAPQARATVVVSPLVALIKDQVNELRGRRGIRPVQGIIGSTSRVVQIEILRD
TASGQVRLLYVSPERLARDPVLRGALGRQQLNGVVVDEAHCVSVWGHDFRPEFRQVPASV
ATFETRPSRIGLTATATPEVEVDIVAAMDMHNPLTVREPSDRPNLRFRVHECADGRDRLR
ELLRFVTWSGSNPGIVYVSKRALAEEVAAVLRRAGHAARAYHAGMVPEQRDAVQEDFDSD
TTRIIVATKAFGMGINKPNIAWVVHYDLPDSLDGYAQEAGRAARARDVIGECLLLYTRAD
IARRRSLVDGHESKSDAAITQQLLSELWRCPQRGESRVFDIDEVADKLGISDDEINVHLA
QLERVNALRLGLDCSARGTVEVGSREPTEESDRRLFRELFYKANRARPNVRVQLDFQQLY
DQRGYEPDTLERKLIDWSLDRLVTFSSSRRLRRVHLLARVASRPALERESARWKLWQQRR
LKAMIAYATNQSDCRRVVIGTHFGDQIADCTSRNIAPCDRCSQESPPWTTLADHLVPDPE
LLVNAELTVLQAIAWASSYRRGSYGEASLRAAVLGKESLGEGRPLGAGVLSCPQFGALRH
VRNGEKRWHEALNKLLSDGLVERRIVERESSRSSYDTLSLTSTGAQTLGIAVSHND
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgccgttcggaccaaatccgccgaacttgccgaacgggggggtcgaactactcgtccaa
ggtgagcagggacgcagccagattgcacagcggttcaaagccgagccgggcacagtgctg
tacgggttaaagtcgtattgggaaggattcgacgcaccgggcgaaacattgtcgtatctc
ttcatcgagaagcccccatatccacacccggatgatcctctggtatccgcacgccaacgc
gcaatcgccgagcggggcgatgaccccttcctcgactacgtcctccccctgacagcgatg
cagttcactcagggattcggacgtctgatcagatccgaaaccgaccgaggtgccgcactt
gtgtgcgaccgccgactgcactcaccgacacaagcacagcgcgtcctcctcggctcacta
cccgaccctacgatccacgaggcggtcgaccgcgacgacgcatggacgcgcgcgatcgaa
ttcgtcactggcgctgcacctgacctgactgcggcaatttcgttcggacgcgacgacgtc
agtcagctgttggaaagcctgcgcctcgttgagggagaggaccctgtgccgaaattcatc
gaggctgccgagaaactatttggcatcactgatctccacgccaagcagctggaggtgatg
tgcgcgatcgctgcaggcaacgatgttctcgccgttctgccaaccggcttcggcaaatcc
gtctgcttccaactgccggccttgctggccccccaagcacgggccactgtcgtcgtctca
ccgctggtcgcgctgatcaaagaccaagtcaatgagctgcgcggccgccgaggtatcagg
ccggtgcaaggaatcatcggctccacttcacgggtagtccagatagaaatactccgtgac
accgccagtggtcaggttcgtcttctctatgtctcacctgaacgactggcccgtgatccg
gtcctgcgtggcgcgctcggacgccagcaactcaacggagtcgtagtggacgaggcgcat
tgtgtttcggtatggggtcacgattttcggcccgaattccggcaggtaccggcgtcagtc
gcgactttcgagacacgcccatcacgtattggattgactgcaacggccactcctgaggtg
gaggtcgacatcgtagcggccatggacatgcacaatcctctcacggtgcgcgaacccagc
gaccggcctaatttgcggttccgagtccacgaatgcgccgacgggagggaccgacttcga
gaacttctgcggttcgtcacgtggtcgggcagcaatcccggcatcgtttatgtctcgaaa
cgtgcactcgccgaggaagtcgcagccgttctacggcgggcgggtcacgccgcgagggcg
taccacgcaggcatggtccccgaacagcgagacgctgtccaggaagacttcgactcagac
accacccgaatcatcgttgctaccaaagcattcggcatgggcatcaacaagcccaatatt
gcgtgggtggttcactacgacctgccggactcactcgatggctacgcgcaggaggccggg
agggcggcacgagcccgcgatgtcatcggcgagtgcttactgctgtacacgagagctgat
attgctcgtcgacgcagtttggtcgatgggcatgaatcgaagtcagacgcagccatcacc
caacaactgctgagcgaactttggcgatgtccgcaacgtggtgagagcagggtatttgac
atcgacgaggttgccgacaagctcggcatcagtgacgacgaaatcaacgtccacttagcc
caactcgaacgcgtcaacgcactgcgcctgggcctcgattgttcagcgcggggcaccgtc
gaagtcggttcacgagagccaacggaagaaagtgatagaaggctgttccgcgaactgttc
tataaggcgaatcgagcccgccctaatgtccgcgttcaactggacttccaacagctctat
gatcagcgtggttatgagccagacacgttagaacgaaagctgattgactggtccctcgac
cgcctcgtgacgttctcgagttctcgtcggcttcgccgggtccatctgctggctagagtt
gcatcccgccccgcactggaacgagagtctgccaggtggaagctgtggcagcagcgtcgc
ctcaaagcgatgatcgcctacgccacaaatcagtcggattgccgacgggtcgtcatcgga
acgcacttcggagaccagatcgccgattgcacaagccggaacatcgcaccctgcgaccgc
tgcagtcaagagtcaccgccatggacgacccttgccgaccacttggtccccgaccccgag
ttgctggtgaacgctgaactcactgtgcttcaggccatcgcctgggcctcgtcgtaccgg
cgcggatcctatggcgaagcgagcctacgcgctgcggtccttggcaaggaatccttgggc
gaaggacgccctctcggtgcaggtgtactcagttgccctcagttcggcgccttgcgtcac
gtacgaaatggggagaagcgctggcacgaggcactgaacaagctgctgtcggatggtctt
gtagaacgtcgcatcgtcgaacgcgaaagctcgcgaagttcctacgacaccctgtctctg
acttcgactggggctcaaacactaggaatcgcggtgtcacacaatgattga
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