Mycobacterium kiyosense: IWGMT90018_42800
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Entry
IWGMT90018_42800 CDS
T09155
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mky
Mycobacterium kiyosense
Pathway
mky03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mky00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IWGMT90018_42800 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mky03021
]
IWGMT90018_42800 (rho)
03019 Messenger RNA biogenesis [BR:
mky03019
]
IWGMT90018_42800 (rho)
Transcription machinery [BR:
mky03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
IWGMT90018_42800 (rho)
Messenger RNA biogenesis [BR:
mky03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
IWGMT90018_42800 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
NACHT
Fungal_virus_P2_C
VWA_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BDB43834
LinkDB
All DBs
Position
complement(4361924..4363831)
Genome browser
AA seq
635 aa
AA seq
DB search
MTDTDLITAGESTDSEKLSNAVRTDSAVVSDVKSNTGSLATMVLPELRALANQAGVKGTS
GMRKNELIAAIQESRGQANGGSASAKTAQDASKADTPPQKDSAQEARAQKRSDATADASA
QEGAAAQEGAPADAQQQNDTQQKNDTQKNDTPRRERRGASRDAGAAGAEKNGGDDSGDGQ
RDQKQAKNERSGDSGGDQGGDQQGGQQRGGSNQQDDDGDGRQGRRGRRFRDRRRRGERTG
EGGGEAELREDDVVQPVAGILDVLDNYAFVRTSGYLAGPHDVYVSMNMVRKNGLRRGDAV
TGAVRVPREGEGGDKNPRQKFNPLVRLDTINGGSIEDAKKRPEFSKLTPLYPNQRLRLET
TPDRLTTRVIDLIMPIGKGQRALIVSPPKAGKTTIMQDIANAITRNNPECHLMVVLVDER
PEEVTDMQRSVKGEVIASTFDRPPSDHTQAAELAIERAKRLVEQGKDVVVLLDSITRLGR
AYNNASPASGRILSGGVDSTALYPPKRFLGAARNIEEGGSLTIIATAMVETGSTGDTVIF
EEFKGTGNAEPKLDRKIAERRVFPAVDVNPSGTRKDELLLSPDEFGIVHKLRRVLSGLDS
HQAIDLLMSQLRKTKTNYEFLVQVSKTTPGNMDGD
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
gtgactgatacggacctcatcacggctggcgaaagcaccgacagcgagaagctgtcgaac
gccgtgaggacagactctgccgtcgtctccgacgtcaagagcaataccggctcgctggcc
accatggtgctgcccgaacttcgtgccctggctaaccaggccggtgtcaaagggacatcg
ggcatgcgcaaaaacgaattgatcgccgcgatccaggaaagccgcggacaggccaacgga
gggtcggcgtcggcgaagacggcgcaggacgcctccaaggccgacacgccgccgcagaag
gactccgcgcaggaggcgcgcgcccagaagcgatcggacgccactgcggacgcctcggct
caggaaggcgccgcggctcaggaaggcgccccggccgacgcgcagcagcagaacgacacg
caacagaaaaacgacacgcagaagaacgacacgccgcgtcgcgaacgtcgcggtgcctcc
cgggatgccggcgccgccggcgccgagaagaacggcggcgacgacagcggcgacgggcag
cgcgaccagaagcaggctaagaacgagcgctccggcgactcgggcggcgaccagggcggt
gaccagcaaggcggtcaacagcgcggcggctcgaatcagcaggacgacgacggcgacggc
cgccagggccggcgtggccggcgcttccgtgaccgccggcgtcgcggcgaacgcaccggt
gagggtggcggcgaggccgaattgcgcgaggacgacgtcgtgcagccggtcgccgggatt
ctcgatgtcctggacaactatgccttcgtacgcacctccggctacctggccggaccccac
gacgtctacgtctccatgaacatggtccgcaagaacggtctgcgccgcggcgacgccgtg
accggtgccgtgcgggtgccccgcgagggcgaagggggcgacaagaacccccggcagaag
ttcaacccgctggtgcgcctggacaccatcaacggtggctccatcgaggacgccaagaag
cggcccgaattcagcaagttgaccccgctgtaccccaaccagcggctgcgcttggagacc
actcccgaccggctgaccacccgcgtgatcgacctgatcatgccgatcggtaagggccag
cgtgcgctgatcgtgtcgccgcccaaggccggtaagaccacgatcatgcaagacatcgcc
aacgcgatcacccgcaacaaccccgaatgtcacctgatggtggtgctcgtcgacgagcga
cccgaagaggtcaccgacatgcagcgctcggtcaagggcgaagttatcgcctcgaccttc
gaccggccgccgtcggaccacacccaggccgccgaactggccatcgaacgcgccaagcgt
ctggtcgagcagggcaaggacgtcgtagtgctgctcgactccatcacccgactcggtcgt
gcttacaacaacgcctcgccggcgtcgggccgcatcctgtccggtggtgtcgactccacc
gcgctgtacccgcccaagcggttcctcggcgcggcacgcaacatcgaggagggcgggtcg
ctgaccatcatcgccaccgcgatggtcgagaccgggtcgaccggtgacacggtcatcttc
gaggagttcaagggcaccggtaacgccgagcccaagctggaccgcaagatcgccgagcgg
cgggtgttcccggcggtcgacgtcaacccgtccggcacccgcaaggacgagttgctgctg
tcgcccgacgagttcggcatcgtgcacaaactgcgtcgcgtgctgtcgggtctggactcc
caccaggccatcgacctgttgatgtcgcagctgcgcaagaccaagaccaactacgagttc
ctggtccaggtgtccaagacgacaccgggcaacatggacggggactga
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