Mycobacterium kiyosense: IWGMT90018_48020
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Entry
IWGMT90018_48020 CDS
T09155
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mky
Mycobacterium kiyosense
Pathway
mky03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mky00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IWGMT90018_48020 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mky03019
]
IWGMT90018_48020 (deaD)
03009 Ribosome biogenesis [BR:
mky03009
]
IWGMT90018_48020 (deaD)
Enzymes [BR:
mky01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
IWGMT90018_48020 (deaD)
Messenger RNA biogenesis [BR:
mky03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IWGMT90018_48020 (deaD)
Ribosome biogenesis [BR:
mky03009
]
Prokaryotic type
rRNA helicases
IWGMT90018_48020 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
UvrA_inter
HEM4
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
BDB44356
LinkDB
All DBs
Position
complement(4891784..4893469)
Genome browser
AA seq
561 aa
AA seq
DB search
MDTPPETFADLQIHPSVLRAIADVGYESPTGIQAATIPALLAGTDVVGLAQTGTGKTAAF
AIPILSKIDTTSKATQALVLAPTRELALQVAEAFGRYGAHLPQLNVLPIYGGASYTVQLA
GLRRGAQVVVGTPGRVIDHLERGTLDLSRVDYLVLDEADEMLTMGFAEEVDRILSETPEY
KQVALFSATMPPAIRKITTKYLHDPLEVTSKAKTATAENISQRYIQVAGPRKMDALTRVL
EVEPFEAMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQGQRERTIAALKDGNIDILV
ATDVAARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRKGSALLFVSPRERHLLKAI
EKATRQPLTEAALPTVEDVNAQRVAKFADSITSALGGQGIELFRRLVEDYEREHDVPMAD
IAAALALQSRDGEAFLLAPDPPPERRDREKRGPQDRTERPRQTKPFTTYRIDVGKRHKIG
PGAIVGAIANEGGLHRSDFGHIAIGPDFSMVELPAKLPRAVLKKLENTRISGVLINLRPD
RQSDKRAPRNDGGRPRRKPAG
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggacacccctcccgaaaccttcgccgacctgcagattcacccgtcggtcctgcgggcg
atcgcagacgtcggctacgagtcgccgaccggcatccaggcggccaccattccggcgttg
ctcgccggcaccgacgtcgtcgggctggcccagaccggcaccggcaagacggcggcgttc
gcgatcccgatcctgtccaagatcgacaccaccagcaaggcgactcaggcgctggtgcta
gcgcctaccagggagctggcgctgcaggtggccgaggctttcggccgctacggggcgcat
ctgccgcagctcaacgtgctgcccatctacggtggggcgtcgtacaccgtccagctggcg
gggctgcgcaggggcgcacaggtagtggtcggcacccccggccgggtcatcgaccacctc
gagcgcggcacgctggacctgtcccgggtggactacctggtgctcgacgaggccgacgag
atgctcaccatgggcttcgccgaagaggtggaccgcatcctgtccgagaccccggagtac
aagcaggtcgccctgttctcagcgaccatgccgccggccatccgcaagatcaccaccaag
tacctgcatgacccgctggaagtcacctcgaaggcgaaaaccgctaccgcagagaatatt
tcacagcgctacatccaggtggcgggcccgcgcaagatggacgcgctcacgcgggtgctc
gaggtggagccgttcgaggcgatgatcgtcttcgtgcgcaccaagcaggctaccgaggag
gtcgccgaaaagctgcgtgcccgagggttttccgccgccgccatcaacggtgacatcccg
cagggtcagcgggagcgcaccatcgccgcactcaaggatgggaacatcgacatcctggtc
gccaccgacgtggcggcgcgcggactggatgtggagcgcatctcgcacgtgctgaactat
gacatcccgcacgacaccgagtcctacgtgcaccgcattgggcgcaccggccgcgccgga
cgcaaaggttcggccttgctgttcgtctcgccacgagaacgccacctgctcaaggcgatc
gagaaggccacccggcagccgctcaccgaggcggcgctgcccaccgtcgaggatgtcaac
gcacaacgggtcgccaagttcgccgactcgatcaccagcgcgctgggcggccagggcatc
gagctgttccggcggttggtggaggattacgaacgcgagcacgacgttccgatggccgac
atcgccgccgcgctggcgctgcagtcccgcgacggcgaggcgttcctgctggcgcccgac
ccgccgccggagcgacgcgatcgcgaaaaacgaggcccgcaggatcgtaccgaaaggccc
aggcagacaaagcctttcaccacctaccgaatcgatgtgggtaagcggcacaagatcggt
ccgggagcgatcgtgggagccatcgccaacgaagggggtctgcaccgcagcgacttcggt
catatcgccatcggacccgatttctcgatggtcgaactcccggcaaagctgcccagggcg
gtgctgaaaaagcttgaaaatacccgcatctcgggtgtgctgatcaaccttcggcccgac
cggcagtccgacaagagggcgccccgcaacgacggtggcagaccgcgccggaaacccgcc
ggatga
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integrated database retrieval system
