Mycobacterium kiyosense: IWGMT90018_52520
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Entry
IWGMT90018_52520 CDS
T09155
Symbol
uvrD1
Name
(GenBank) ATP-dependent DNA helicase UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mky
Mycobacterium kiyosense
Pathway
mky03420
Nucleotide excision repair
mky03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mky00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IWGMT90018_52520 (uvrD1)
03430 Mismatch repair
IWGMT90018_52520 (uvrD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mky03400
]
IWGMT90018_52520 (uvrD1)
Enzymes [BR:
mky01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IWGMT90018_52520 (uvrD1)
DNA repair and recombination proteins [BR:
mky03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IWGMT90018_52520 (uvrD1)
MMR (mismatch excision repair)
Other MMR factors
IWGMT90018_52520 (uvrD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
CarD_TRCF_RID
DEAD
DUF3013
ResIII
Motif
Other DBs
NCBI-ProteinID:
BDB44806
LinkDB
All DBs
Position
complement(5347914..5350235)
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AA seq
773 aa
AA seq
DB search
MSVHAADAKSEADQLLEGLNPQQRQAVVHQGSPLLIVAGAGSGKTAVLTRRIAYLIAERG
VSVGQILAITFTNKAAAEMRERVVNLVGPRARYMWVSTFHSSCVRILRNQAALIEGLNSN
FSIYDADDSRRLLQMIGRDMGLDIKRYSPRLLANAISNLKNELIDPHQAVANLTDESDEL
TRTVAAVFGEYQRRLRAANALDFDDLIGETVAVLQTFPDIAQYYRRRFRHVLVDEYQDTN
HAQYVLVRELVGHDAQDDVPPAELCVVGDADQSIYAFRGATIRNIEDFERDYPDATTILL
EQNYRSTQNILSAANSVIARNSGRREKRLWTDAGEGELIVGYVADNEHDEARFVADEIDA
LADRGEITYNDVAVFYRTNNSSRSLEEVFIRAGIPYKVVGGVRFYERKEIRDIVAYLRVL
DNPGDAVSMRRILNTPRRGIGERAEACVAVYAENTGASFADALQAAAAGKVPMLNSRAEK
CIAGFVELLDELRGHLDDDLGDLVEAVLERTGYRRELESSTDPQELARLDNLNELVSVAH
EFSIDRALQTNEAAALESETDTEDVPDTGVLAAFLERVSLVADSDEIPEHSSGVVTLMTL
HTAKGLEFPVVFVTGWEDGMFPHMRALDDPVELSEERRLAYVGITRARQRLYVSRAIVRS
SWGQPMLNPESRFLREIPQQLIDWRRVAPKPSFSAPVSGAGRFGTPRVAPARSGAGKRPL
IVLEPGDRVTHDKYGLGRVEEVSGAGESAMSLIDFGSAGRVKLMHNHAPISKL
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgcacgctgctgacgcaaaatccgaagccgaccaactgctggagggcctcaac
ccgcaacaacgccaggcggtggtccatcagggttcgccgctgctgatcgtcgcgggcgcc
ggctcgggcaagaccgcggtgctgacccgccgcatcgcctacctgatcgccgagcgcggc
gtcagcgtcggccagatcctggcgatcaccttcaccaacaaagccgccgccgagatgcgc
gaacgggtggtcaacctcgtcggtccccgtgcccgctacatgtgggtgtcgacgttccac
tcgtcctgcgtgcggatactgcgcaaccaggccgcgctgatcgagggactgaactccaac
ttctccatctacgacgccgacgactcgcgccggctgctgcagatgatcggccgcgacatg
ggactggacatcaagcggtactcgccgcggttgttggccaacgccatctccaatctgaag
aacgaactgatcgacccgcaccaggcggtggcgaacctgaccgacgagtccgacgagctg
acccgcaccgtcgccgccgtcttcggcgaataccagcggcggctgcgcgcggccaacgca
ctggacttcgacgatctgatcggcgagaccgtcgcggtcctgcagacgttcccggatatc
gcgcagtactaccggcggcggttccggcacgtgctggtcgacgaataccaggacaccaac
cacgcgcaatacgtgctggtgcgcgagttggtcggccacgatgcccaggacgacgtgccg
ccggccgagctgtgtgtggtcggtgacgccgaccagtccatctacgccttccgcggcgcc
accattcgcaacatcgaggacttcgagcgcgactacccggacgcgacaacgattctgctg
gaacagaattaccgctcgacgcagaacatcctgtcggcggccaactcggtgatcgcccgc
aactccgggcgccgcgaaaagcggctgtggaccgacgccggcgagggcgaactgatcgtg
ggctacgtcgccgacaacgagcacgacgaggcccgcttcgtggccgacgagatcgacgcg
ctggccgaccggggtgagatcacctacaacgacgtcgcagtgttctaccgcaccaacaac
tcctcgcgctcgctggaagaggtgttcatccgggccgggatcccgtacaaagtcgttggc
ggagtgcgcttctacgagcgcaaagagatccgcgacatcgtcgcctacctgcgggtgctg
gacaaccccggcgacgcggtcagcatgcggcgcatcctgaacacgccgcgccgcggcatc
ggcgagcgagccgaggcgtgcgtggcggtgtacgccgagaacaccggcgccagcttcgcc
gacgcactgcaggccgccgccgccggcaaggtgccgatgctcaactctcgcgccgagaag
tgcatcgccggtttcgtcgaactgctcgacgaactgcgcgggcatctcgacgacgacctc
ggtgatctggtcgaggcggtgctggagcgcaccggataccggcgcgagctggagtcctcg
accgacccgcaggagctggcgcggctggacaacctcaacgaactcgtcagcgtcgcacac
gaattcagcatcgaccgggccttgcaaaccaacgaagcggccgcactggaatccgagacc
gacaccgaagacgtccccgacaccggggtgttggccgcgttcctggagcgggtgtcgctg
gtcgccgacagcgacgagatccccgagcacagctccggcgtcgtcacgctgatgacgctg
cacaccgccaagggcctggagttcccggtggtgttcgtgaccggctgggaggacgggatg
ttcccgcacatgcgggcgctggacgacccggtggagctttccgaggaacggcggctggcc
tatgtcggcatcacccgggcccggcagcggctgtacgtgagcagggccatcgtccggtca
tcgtggggacagccgatgctgaacccggaatcgcggttcctgcgcgagattccgcaacag
ctcatcgactggcgccgcgtcgcgccgaagccgtcgttcagtgcgccggtgagcggcgcc
ggccggttcggtacgccgcgcgtcgcaccggcgcgttccggggcgggcaagcgcccactg
atcgtgctggagcccggtgatcgggtgacgcacgacaagtacggtctggggcgggtcgag
gaagtctccggcgccggcgaatcggcgatgtcgctgatcgacttcggcagcgcgggccgg
gtgaagctgatgcacaaccacgccccgatcagcaagctgtga
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