Mycobacterium kiyosense: IWGMT90018_53540
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Entry
IWGMT90018_53540 CDS
T09155
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
mky
Mycobacterium kiyosense
Pathway
mky03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mky00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
IWGMT90018_53540
09124 Replication and repair
03420 Nucleotide excision repair
IWGMT90018_53540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mky03021
]
IWGMT90018_53540
03400 DNA repair and recombination proteins [BR:
mky03400
]
IWGMT90018_53540
Enzymes [BR:
mky01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IWGMT90018_53540
Transcription machinery [BR:
mky03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
IWGMT90018_53540
DNA repair and recombination proteins [BR:
mky03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
IWGMT90018_53540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
DUF7108
Motif
Other DBs
NCBI-ProteinID:
BDB44908
LinkDB
All DBs
Position
5462415..5464064
Genome browser
AA seq
549 aa
AA seq
DB search
MTDGPLIVQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAG
HDAEQVVDALVSFSRYAVPQPLLVDIVDTMARYGRLQLVKHPAHGLTLVSLDRAVLEEVL
RNKKIAPMLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLQPDGW
ELRDYQQLATDSFWAGGSGVVVLPCGAGKTLVGAAAMAKAQATTLILVTNIVAARQWKRE
LVARTSLTEDEIGEYSGEKKEIRPVTISTYQMVTRRSKGEYRHLELFDSRDWGLIIYDEV
HLLPAPVFRMTADLQSRRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAP
AECVEVRVTMTDSERMNYATAEPEERYKLCSTVHTKVAVVKSILKNHPGEQTLVIGAYLD
QLEELGAELDAPVIQGSTKTREREELFDKFRTGEVSTLVVSKVANFSIDLPEASVAVQVS
GTFGSRQEEAQRLGRLLRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRD
ADDLLGPAI
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgactgacggaccgttgatagtgcagtccgacaagactgtgctgctcgaggtggatcac
gagctcgcgggggcggcgcgcgccgccatcgcgccgttcgccgagctggaacgcgcaccc
gagcacgtgcacacctatcgcatcacgccactggcgctgtggaacgcgcgagcggcgggc
cacgacgccgagcaggtggtcgacgcactggtcagcttctcgcgctacgcggtgccccag
ccgttgctcgtcgacatcgtcgacaccatggcgcgatacgggcgattgcaactggtcaag
caccccgcgcacggtctgacgctggtcagtctggaccgcgcggtgctcgaggaagtgttg
cgcaacaagaagatcgcgccgatgctgggtgcccgcatcgatgacgacaccgtcgtcgtg
caccccagcgagcgcggccgggtcaagcagctgctgctcaagatcggttggcccgcagag
gatctcgccgggtacgtggacggcgaggcacaccccatcagcctgcagcccgacggctgg
gagttgcgtgactatcagcagctggccaccgattcgttctgggccggcgggtcaggtgtg
gtggtgctgccgtgcggggccggcaagacgctggtcggcgcggcggcgatggccaaagct
caggccaccacgctgatcctggtcaccaacatcgtggcggcccggcagtggaaacgtgag
ttggtggcgcgcacgtcgctgaccgaagacgagatcggcgaatactccggagaaaagaag
gagattcgccccgtcaccatctcgacgtatcagatggtcacccgtcgcagcaagggcgag
taccggcacctcgaactcttcgacagccgcgactggggactgatcatctacgacgaggtg
cacctgctgccggcgccggtgttccggatgaccgccgacctgcagtcgcggcggcgactt
ggcttgaccgccaccctcattcgggaagacggccgcgagggcgacgtgttctccctgatc
ggcccgaagcggtatgacgcgccgtggaaggacatcgaggcgcagggctggatcgctccg
gcggagtgcgtagaagttcgggtcaccatgaccgacagcgagcggatgaactacgcgact
gccgaaccagaggagcgctataaactgtgctcgacggtgcacaccaaagttgctgtggtc
aagtcgattctgaaaaatcatcccggcgagcagacgctggtgatcggcgcctacctggac
cagctcgaggaactcggcgccgaactggatgcaccggtgattcaggggtcgacgaagact
cgggagcgtgaggagctgttcgacaagttccgcaccggcgaggtctccacgttggtggtg
tccaaagtcgccaacttctccatcgatctaccggaagcgtcggtggcggtgcaggtttcg
ggtaccttcgggtcccgccaagaggaggcccagcggctgggccggctgctgaggccgaag
gccgacggcggcggcgccatcttctattcggtggtggcacgcgacagcctggatgccgag
tacgccgcgcaccggcaacgcttcctggccgagcagggctacggctacatcatccgcgac
gccgatgacctgctggggccggccatctga
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