Methanocorpusculum labreanum: Mlab_0072
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Entry
Mlab_0072 CDS
T00472
Name
(GenBank) pseudouridylate synthase TruB domain protein
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mla
Methanocorpusculum labreanum
Brite
KEGG Orthology (KO) [BR:
mla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mla03016
]
Mlab_0072
Enzymes [BR:
mla01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Mlab_0072
Transfer RNA biogenesis [BR:
mla03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Mlab_0072
Prokaryotic type
Mlab_0072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
Pus10_C
DKCLD
Xre_MbcA_ParS-like_N
Motif
Other DBs
NCBI-ProteinID:
ABN06250
UniProt:
A2SPJ4
LinkDB
All DBs
Position
complement(76186..77034)
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AA seq
282 aa
AA seq
DB search
MGYTGIILVDKPRGPTSHQVAAWVGKMLKSDVGHSGTLDPMVSGVLVVMLGKAVRLAPLL
LQHEKEYVACMRLHADIPRERVEEVVKQFTGRVYQRPPRRSAVKRALRIRVIYRIELIDM
QDRLVLLKIRCEAGTYIRSVCVHIGNVLGCGGQMIELRRTKSGGFSCDEAHTLHEIRDAV
ELKDEAALSAMILPPEQAIGDIPKIVIRDKAAKAVANGAMLAGVGAISVEKFSRGQSVAL
ITQSGKLIALAESLFDSDKIDCGKPGLIARSTRVFATPNSVT
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgggatataccgggatcattttggttgacaagccgagagggcccacgagtcatcaggtt
gctgcctgggtcggcaagatgctgaagtcggacgtcggtcattcgggaacactcgatccg
atggtctcgggggttcttgtcgtaatgcttggtaaagcagtgagactggctcccctcctg
cttcagcatgaaaaagagtacgttgcatgcatgcgtctccatgcagatatcccgcgtgaa
cgcgtcgaagaggtcgtaaagcagttcaccggcagagtttatcagcggccgccgagacgg
tctgcagtaaaacgtgcccttcgcattcgggtgatctacagaatcgaactcatcgatatg
caggacagactggttctcctgaaaatcaggtgcgaagcgggaacttatatcaggtcggtt
tgcgtccacatcggcaatgttctcggctgcggcggtcagatgatagaactgcgcagaaca
aaatccggcggattttcatgcgacgaggcacacactctgcacgagattcgcgatgcagtg
gaactgaaagatgaagcggcactttcggcgatgattcttcctcctgagcaggcaattggg
gatatcccaaagattgtgattcgcgacaaagcggcaaaggcagttgctaatggagcaatg
ctcgccggagtcggcgctatatcggtggaaaaattttcacgcgggcagagtgttgctctg
attacgcaaagcggaaagctcatcgctcttgccgaatctctttttgattcggacaaaatc
gattgcgggaaacccggtctgattgcgagatcaacacgcgtgttcgcgacccccaactca
gtaacttaa
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