Methanocorpusculum labreanum: Mlab_0371
Help
Entry
Mlab_0371 CDS
T00472
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mla
Methanocorpusculum labreanum
Pathway
mla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mlab_0371
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mla03019
]
Mlab_0371
03009 Ribosome biogenesis [BR:
mla03009
]
Mlab_0371
Enzymes [BR:
mla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Mlab_0371
Messenger RNA biogenesis [BR:
mla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Mlab_0371
Ribosome biogenesis [BR:
mla03009
]
Prokaryotic type
rRNA helicases
Mlab_0371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-ProteinID:
ABN06547
UniProt:
A2SQE1
LinkDB
All DBs
Position
348831..350801
Genome browser
AA seq
656 aa
AA seq
DB search
MEETKTFAEFAISEELLQAIGDMGFEEPTPIQAMAIPQILDGKDVTGQAQTGTGKTAAFG
IPIIERLDPDNKNVQALVLSPTRELAIQTAEEFSRLMKYKKGLNVVPIYGGQPIERQLRA
LKGTVQVVIGTPGRVIDHIKRGTLHLDSVTMFILDEADQMLDMGFREDIEDIFRDTPKDR
QTILFSATMPQPILDITRRFQRDPQFVKITRKELTVPQIEQTYIEVRERDKLEALCRTLD
MNNPELALVFCNTKRTVDDLMSRMQARGYFVEALHGDMKQQQRDRVMARFRSGSIDVLIA
TDVAARGIDVDDVDIVFNYDVPQDVEYYVHRIGRTARAGRTGKSVTFVAPREIYKLRDIQ
RYAKIQIAKTPLPTLDDVAEMKQQIFLDKVRDIMAAGNLELYLPLVEQLLETETDVDSES
TSEITSIQVAAALLKMHLDSGKNAAQSEEIKPLQPSPSSSETFTPGTVENSGAEPGMVRF
RISLGKNQQIRPKDIVGAFAGECDIPGSSIGRIDLYNNYSYVDVPLEHANLVAEVMGSKT
IRGQELEISIAAPRTPEEEERERDRDRSGDRRGGSSGYRSGDRNSGSGERRSYNNNRGSY
GSRGGSNYRSGDRSSGSGERRSYGNSGSSDRRSFSRGSGDRSSSRRDSGHGFYGRD
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaactaaaacattcgcggagttcgctatctctgaagaactacttcaggcgata
ggcgacatgggatttgaggagccgacacctatccaggcaatggcaataccacagattctt
gatgggaaagatgtaacggggcaggctcagacgggaacgggaaaaacggcagcgtttggg
attccaattattgaaaggcttgatccagataacaaaaatgtacaggcacttgtcctgtcc
ccaacaagggaacttgcaatacagaccgccgaggaattttcccggctgatgaaatataaa
aaaggactgaatgtcgtcccaatttatggtggacagccgatcgaacgccagcttcgtgcc
ctcaaaggtacggtgcaggtcgtcatcgggaccccgggtcgtgtcattgatcatatcaaa
cgcgggacacttcatctcgattcagtcaccatgttcatcctggatgaagctgatcagatg
ctcgatatgggtttccgtgaggatatcgaggacattttccgcgatacgcccaaagaccgg
cagacaattctgttttcggcaactatgccgcagccgatcctggacattaccagaaggttc
cagcgtgatcctcagttcgtgaagatcacccgcaaggaacttactgtcccccagatcgag
cagacgtatattgaggtcagagaacgcgacaagcttgaagcgctctgccgtactcttgat
atgaacaaccccgaacttgctctcgtgttctgtaacacgaagagaacggtggatgattta
atgagtcgtatgcaggcgcgcggatactttgtggaggccctccacggagatatgaagcag
cagcagcgtgaccgcgtcatggcacgtttccggtccggttcaatcgatgttctgatcgca
acggatgttgcagcacgcggtatcgatgtcgatgatgtggatatcgttttcaattacgat
gttccccaggatgtcgagtattatgttcaccggatcggcagaactgcccgtgccggaagg
accggaaaatccgtgacgtttgttgctccgcgtgagatctacaaactcagggatatccag
cggtatgcaaagatccagatcgccaagacacctctgccgacgcttgacgacgttgccgag
atgaagcagcagatcttcctcgacaaagtcagggacatcatggccgcaggaaatcttgag
ctttatctgcctcttgtcgagcagcttctcgagacggaaaccgatgtcgattccgaatcc
acttcggagataaccagtatccaggttgcggcagctcttctcaagatgcaccttgacagt
gggaaaaatgccgctcagagtgaagagatcaaacctctccagccgtccccctcaagttct
gagacgtttacgcccgggaccgttgaaaacagcggtgccgagcccgggatggtaagattc
cgtatctcccttggtaaaaaccagcagatccgtccaaaggatatcgtcggagcctttgca
ggtgagtgcgacatacccggctcttcgattggacgaatcgatctctacaacaactactcc
tatgtagatgtccccttagagcatgccaacctcgttgccgaagttatgggttccaagacc
attcgcggtcaggaacttgagatttccatcgcagcaccgcgtactccggaagaagaggaa
cgcgagcgtgatcgggacagaagcggagataggcgcggcggatcctcaggataccgcagt
ggtgaccggaactccggcagcggtgaacgccgcagttataacaacaaccgtgggtcatac
ggaagccgcgggggcagcaactaccgaagcggtgatcggagttccggcagcggtgaacgc
cgcagctatggaaattccggaagcagcgaccgaagaagtttcagccgtggaagcggcgat
cggagttcctccagaagagattccggtcacggcttctacggaagagactaa
DBGET
integrated database retrieval system
