Methanocorpusculum labreanum: Mlab_0440
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Entry
Mlab_0440 CDS
T00472
Name
(GenBank) TATA-box binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
mla
Methanocorpusculum labreanum
Pathway
mla03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mla00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Mlab_0440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mla03000
]
Mlab_0440
03021 Transcription machinery [BR:
mla03021
]
Mlab_0440
Transcription factors [BR:
mla03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
Mlab_0440
Transcription machinery [BR:
mla03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
Mlab_0440
RNA polymerase III system
TFIIIB
Mlab_0440
RNA polymerase I system
SL1/TIF-1B
Mlab_0440
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
Motif
Other DBs
NCBI-ProteinID:
ABN06616
UniProt:
A2SQL0
LinkDB
All DBs
Position
complement(424244..424810)
Genome browser
AA seq
188 aa
AA seq
DB search
MDGKTYSSLKIENIVASGVIAEEIDLAEISEKIDGCELNTKRFPGAVYRIDSPKMASLIF
SSGKVVLTGIRNEESLGEGLAKVLASLKEAGVNVLDVPRVAVTNIVCSYDIGRFINLNRV
VATLSLEAIEYEPEQFPGLVYRIKDPKIVALLFSSGKIILTGGKNLDDVRKGLDFLEESL
KDVLTEQK
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atggatgggaaaacatactcctctctgaagattgaaaatatcgtcgcctccggcgtaatt
gccgaagaaattgatcttgcagagatctccgaaaaaattgacgggtgtgaactcaataca
aaacgtttccccggtgcagtgtatcgtatcgacagtccgaaaatggcatcgctgatcttc
tcgtcgggaaaggtcgtgcttaccggaatcagaaatgaagagtcgctgggagaaggtctc
gcaaaggtgcttgcctccctgaaagaagcaggcgtaaacgtgctggatgtcccgcgggtc
gccgtgaccaacatagtctgttcctacgacatcggtcggtttatcaacctgaaccgtgtg
gtcgcaaccctctctctcgaagccatcgagtatgaacccgagcagtttccgggtctcgta
taccgtatcaaagatccgaaaatcgttgcactgctcttctcgtctggaaagatcatctta
accggcggtaagaatcttgacgatgtcagaaaaggtctggacttcctcgaagagagtctc
aaagacgtcctgaccgaacaaaaataa
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