Methanocorpusculum labreanum: Mlab_0911
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Entry
Mlab_0911 CDS
T00472
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
mla
Methanocorpusculum labreanum
Pathway
mla03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Mlab_0911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mla03400
]
Mlab_0911
DNA repair and recombination proteins [BR:
mla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mlab_0911
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Mlab_0911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Kinesin
Viral_helicase1
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ABN07082
UniProt:
A2SRX6
LinkDB
All DBs
Position
complement(905606..907540)
Genome browser
AA seq
644 aa
AA seq
DB search
MPDQFSLQSTYSPKGSQPEAIEELTEGLLDGEQFQTLLGVTGSGKTFTIANVIQNVQRPT
LVLAHNKTLAAQLYNEFKDFFPNNHVEYFISYYDYYQPESYIAKKDQYIEKDASINPKIE
MMRLAATASILSHRDTIVVASVSCIYGLGNPENFQNLGFEVRRGQKITRRELLERLLSIL
FERNDIELMPGRFRVKGDTVDLIPGYFNNIIRIELFGDTIDRISEIDKTTGKEKERMEYF
FIYPARHFVTPESEKQAAIDSIRGELEEVLAENRLDDLAAHRLRQRTQYDLEMIEETGSC
KGIENYSRHFDRRAAGEKPYCLLDYFPDDFLMVIDESHQSLPQVRGMYNGDHSRKQSLVE
YGFRLPSAFDNRPLKFVEFEKYLKQVIFVSATPGDYERKYSSQIIEQIIRPTGLVDPVVE
VRPITGQTDDLLREISAVIGRGDRALVTTLTKKLAEELTEYLAGQGIKTRYLHSEIQTLE
RTELIRQLRLGMFDVLVGINLLREGLDIPEIGFIGILDADKEGFLRDARSLIQIIGRAAR
NSDSHVVLYADKMTDSMREALAETARRREMQMAFNTEHGITPVTIKKPVREKEVDIKDIR
HLPKSEIPNLIIELEAEMNAAAAALDFERAIQLRDRVKELRGGS
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatcagttctcgcttcaatccacctattcgccgaaaggatcccagccggaagcg
atcgaagaactgaccgaaggccttctcgatggtgagcagtttcagacgcttctcggggtc
accggttcggggaagacgtttacgatcgcaaacgtcatccagaacgttcagcgcccgact
ctcgttctggcccataacaagactctcgccgcccagctctacaacgagttcaaggatttt
tttccgaacaatcacgtcgagtacttcatctcctactatgactactatcagccggagagt
tacatcgcgaaaaaggatcagtatatagaaaaggacgcctccatcaatccgaaaattgag
atgatgcgtcttgccgcgaccgcgtcgatcctctcgcaccgggatacgatcgtggtcgcg
tcggtttcctgtatttacggtctcggcaacccggaaaacttccagaatctcgggttcgag
gtccgcaggggacaaaaaatcacccgccgcgaacttctcgaacggctgctctcgatcctt
ttcgagagaaacgacatcgagttgatgcccggtcggttccgggtcaaaggcgacacggtg
gatctgatcccgggttatttcaataatatcatcaggatcgaactgttcggcgacacgatc
gacaggatcagtgagatcgataaaaccacgggaaaggagaaggagcggatggagtatttc
ttcatctatccggcccgccatttcgtcacgcccgagtcggaaaagcaggcagctattgat
tcgatccggggagagctggaagaggtgctcgccgagaaccgtctggacgatcttgcggcg
caccggctgcgtcagaggacccagtatgatctggagatgatcgaggagaccggttcctgt
aaagggatcgagaattattcccggcacttcgaccggcgtgccgcgggagagaagccgtac
tgtctgctggattatttcccggatgattttctgatggtgatcgacgagagccatcagtct
ctcccgcaggtccgggggatgtacaacggcgatcattcccgcaagcagtcccttgtggaa
tacgggttccgtctgccgagtgcgttcgacaaccggccgctgaagttcgttgagttcgag
aagtatctcaaacaggtgatcttcgtttcggcaacgccgggagattacgagcggaagtat
tcgtcacagatcatcgagcagatcatccgcccgactggtctcgttgatccggtggttgag
gtccggccgatcacgggccagacggatgatctgctgagagagatcagcgccgtcatcggg
cggggcgaccgtgctcttgtgacgacgctcacaaaaaaactcgccgaagagctgaccgag
tatcttgcggggcaggggatcaagacccggtatctgcattcggagatccagacactggag
cggaccgagcttatccgtcagctcaggcttgggatgttcgatgttctggtcggcatcaat
ctgttaagggaggggctggatatcccggagatcgggttcatcggtattctggatgcagat
aaggaggggttcctgcgggatgccaggagtcttatccagatcatcggccgggcggccagg
aactcggactcgcatgtcgtgctgtatgccgataagatgacggattcgatgcgtgaggct
cttgccgagacggcacgccgccgcgagatgcagatggcgttcaatacagagcacgggatc
acgccggtgacgatcaagaaaccggtgcgggagaaggaggtcgatatcaaggatatccgg
cacctgccgaagtcggagatcccgaacctgatcatcgaactggaggccgagatgaatgcg
gcggcggcggcgctggatttcgagcgggcgatccagctgagggatcgggtgaaggagttg
agaggcgggtcatga
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