Methanocorpusculum labreanum: Mlab_1104
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Entry
Mlab_1104 CDS
T00472
Name
(GenBank) DEAD_2 domain protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
mla
Methanocorpusculum labreanum
Pathway
mla03022
Basal transcription factors
mla03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mla00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Mlab_1104
09124 Replication and repair
03420 Nucleotide excision repair
Mlab_1104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mla03021
]
Mlab_1104
03036 Chromosome and associated proteins [BR:
mla03036
]
Mlab_1104
03400 DNA repair and recombination proteins [BR:
mla03400
]
Mlab_1104
Enzymes [BR:
mla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Mlab_1104
Transcription machinery [BR:
mla03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Mlab_1104
Chromosome and associated proteins [BR:
mla03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
Mlab_1104
DNA repair and recombination proteins [BR:
mla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Mlab_1104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
HBB
ResIII
AAA_16
AAA_22
nSTAND3
DEAD
T2SSE
DUF4349
AAA_11
cobW
Motif
Other DBs
NCBI-ProteinID:
ABN07273
UniProt:
A2SSG7
LinkDB
All DBs
Position
complement(1115463..1117493)
Genome browser
AA seq
676 aa
AA seq
DB search
MADTADFFPYQTYRKNQKEMLEEVEKTAEENGILLIDAPTGSGKSSVIASLLAKANGRKI
LVAVRTISQLQIFIRELDLIRQKKQPTLKFVYLIGKGNMCPLGGYGDVYRRCEGVKAFTS
ALMQQRADRGSFDPATDKQILEQIRKQDREHPLICPYFVNSRVFVQSEEGGRRMIPSPEL
RRKSDIAQKQIVRPNELLNFAGKVCPYDLMLSAAKGADVIICNYYHLFNDDIREQLYVNL
QCEEHNVMLLLDEAHNLGDVIQTIQSIRIRDTDIEAAANEVASLRDKVRGSEAVRHILPR
IAEFIDGLQRSNEAEDWFDPQIFNRFIIKGSLYGKPEAMLEDIISIKEAMRERGIERGDY
RESAIEKLCEFLIRLYRSSTDPSFLTVYTKDAETITLEVRNIDPADRLQELVSKHAATIL
ISGTLSPVDSYRKYYFGSMPVKTLSLANSFPKENRLVLGTRDITTAFSKRQNAENTQAIV
EYILAFAKLPGNIAVYFPSYQLQNRFAEACVSKIRNKQVFIEPRESDEANEALKEFISLP
GKHKSGILFAVCGGKWSEGLDYRGDQLTAALVIGLPLAPFTPVRRMVNSYYRRKFGAEGE
FIAYTLPAINKSMQALGRVLRTENDRGVLILGDQRFLEGEIFGGLSPWMQDELMECDVDT
VKSKLEKWGRDASGRL
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggcagacacagctgacttttttccctatcaaacctaccggaaaaaccaaaaggaaatg
ctcgaagaggtagaaaaaaccgccgaagaaaacggcatcctcttaattgacgcaccgacc
ggcagcgggaaatccagcgtgatcgcaagtctccttgctaaagccaacggacgaaagatc
ctcgtcgccgtcagaaccatatcccagctccagatcttcattcgggaactcgacctcatc
aggcagaaaaaacagccgacccttaaattcgtttaccttattggaaagggaaacatgtgc
cctctcggaggatacggggatgtctaccgaagatgcgaaggcgtcaaagcattcacctcg
gcacttatgcagcagagggcagaccgcggttcattcgatccggcaaccgacaaacagatt
ctcgagcagatcagaaagcaggatcgggaacatcctctcatttgtccctacttcgtcaac
agccgggtctttgtccagagcgaagagggcgggcggcgcatgatcccttccccggaactc
agacgcaaatccgatattgctcagaaacagatcgtccgaccaaacgaacttctgaatttc
gcgggcaaggtctgtccctacgacctcatgctctcggccgccaagggagctgatgtgatc
atctgtaactactatcacctcttcaacgacgatatcagagagcagctgtacgtcaatctt
cagtgcgaggagcacaacgtcatgctcctccttgatgaagcccacaacttaggcgacgtc
attcagacgatccagagcattcggatacgggacaccgacatcgaagccgcggcaaacgaa
gtcgcttcactccgcgataaggtccgcggttccgaagcggtccgccatatcctcccgaga
attgccgagttcatcgacgggctccagcgttcgaacgaggcagaggactggtttgacccg
cagatcttcaaccggttcatcatcaaaggttctctgtatggaaaacccgaggcgatgctc
gaagatatcatttccatcaaagaggctatgcgcgaacgcggcatcgaacggggcgactac
cgcgaatcggcgatcgaaaaactctgcgaatttttgatccggctctaccgctcttccacc
gacccgtcgtttctgaccgtttacaccaaagacgccgagaccatcacgcttgaggtcaga
aacatcgatccggccgatcggctccaagagctcgtctccaaacatgcagcaaccattctg
atcagcggaacgctgtcgccggtcgattcctacaggaaatactacttcggcagcatgcct
gtcaaaaccctctcgcttgccaactcgtttcccaaagaaaaccgcctggttcttgggacc
cgggacatcaccacggcattttccaaacgccagaacgccgagaacactcaggcaattgtg
gagtatattcttgcctttgccaaactcccaggaaacatcgcggtctacttcccttcctat
cagttgcagaaccgttttgccgaagcatgcgtaagcaagattcgaaacaaacaggtattc
attgagccgcgtgaatcagacgaggcaaacgaagcgctgaaggagttcatctcgctcccg
ggaaaacataaatccgggatacttttcgccgtctgcggcgggaaatggagcgaaggtctg
gattaccggggcgatcaactgaccgcggccctcgtgataggtctcccgctcgctccgttc
acccccgttcgtcggatggtcaacagttattaccggcgcaagtttggggccgaaggagag
ttcatcgcctacacgcttcctgcgatcaacaaatctatgcaggccctcggtcgtgtcctt
cgaaccgaaaacgaccggggtgttttgattctcggcgaccaaagattccttgaaggcgag
attttcggcggtttatctccctggatgcaggatgaacttatggaatgcgatgtggacacg
gtaaaaagtaagcttgaaaagtggggacgtgatgcgtcagggcgcctgtag
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