Entry |
|
Name |
(GenBank) DNA-directed RNA polymerase, subunit A'
|
KO |
|
Organism |
mla Methanocorpusculum labreanum
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:mla00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Mlab_1161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:mla03021]
Mlab_1161
Enzymes [BR:mla01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Mlab_1161
Transcription machinery [BR:mla03021]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Mlab_1161
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(1179328..1181997)
|
AA seq |
889 aa
MTSPKRIGKIEFGILSPKAIRDMSVCKVIWPDTYDDDGFPYPKGLMDPSLGVIDPGLRCK
TCGQKQGDCPGHFGHIDLAKPVIHVGYTRLIRKLLRVTCRDCGRLLLDKEEIERFSALED
DPYSAETIGEKDIKKERICPYCGDQQFKINFEKPTSFVEIVTEMGEDGKVHKSERKLTSA
DIRERLEKIPDDDLRLLGIDPEVARPEWTVLTVLPVPPVTVRPSIILENGQRSEDDLTHK
LVDIIRINQRFKENQDAGAPQLIIEDLWELLQYHVTTYLDNEVAGCPPARHRSGRPLKTL
SQRLKGKDGRFRGSLSGKRVNFSARTVISPDPNLSIGEVGIPLAIANEMSVPVRVTKQNL
EDMRALIRIGPHRPTLRDPCGANYVNRPDGRRIRLIAGEEGNCDTVAEMIEPGWKIDRQL
RDGDIVLFNRQPSLHRMSIMSHHIKVMNGRTFRLNPAVCPPYNADFDGDEMNLHVPQTEE
ARAEAELLVAVQENILSPRFGGPIIGGLHDHISGIFLLTNQLKWYTKSEFLYLLKYTAME
HLPEPGKVENGIPYWSNKQAFSMILPKDVNMFYKATCCRNCDPCTKNTFCPNDAFVRIVD
GELISGTIDKKSVGAMDGAILNRIIRLHGTQRAKEYIDDLTKLSIRAIMLYGFSYGINDT
DLGKEEYKQIRDVLDTAEHDVANRINIFEQGHLEPMPGRTPEETLEMQVMKELGKARDRT
GDIASRHLGFENSAVVMAVSGARGSMLNIAQMAGCIGQQAVRGERIVRGYEDRTLPHFKR
SDKGADAHGFVRNSYKSGLNPTEFFFHAIGGREGLVDTAVRTSQSGYLQRRMINALQDLK
VAYDGTVRSTGGKIIQFVYGEDGTDPAKSASGLPVDVKGIAESVLKEEI |
NT seq |
2670 nt +upstreamnt +downstreamnt
atgacctcgccaaagagaatcggcaagatcgagttcggtatcctttccccgaaagcgatc
cgcgacatgagtgtctgtaaggtcatctggccggacacctacgacgacgacggattcccc
tacccgaaaggtctcatggacccgagtctcggtgttatcgatccgggacttcgctgcaag
acctgcggtcagaagcagggcgactgtccgggccacttcggtcacatcgatctcgcaaaa
ccggtcatccatgtcggatacacccgcctgatcagaaaacttctccgtgtcacctgccgt
gactgcggccggcttcttctcgacaaagaagagatcgaacgcttctccgcacttgaagac
gatccctactctgccgaaaccattggcgagaaggatatcaagaaggagcgtatctgcccc
tactgcggtgatcagcagttcaagatcaacttcgagaagccgacctcattcgttgagatc
gttaccgagatgggcgaggacggaaaagtccacaagtcggaacgcaaactgacctccgcc
gacatccgtgaacgcctcgaaaagatcccggacgacgacctccgtcttctcggtatcgac
cccgaagtcgcaagacccgaatggaccgttcttactgtccttcctgtcccgccggtaacg
gtccgtccgtccattatccttgaaaacggtcagagatccgaggatgatctgacccacaag
cttgtggatatcatcaggatcaaccagcgctttaaggaaaaccaggacgcaggtgccccg
cagctcattattgaggatctgtgggaacttctccagtaccacgtcaccacctacctcgac
aacgaggtcgcaggatgcccgccggcaagacaccggtccggcagaccgctcaagacactc
tctcagcgtctgaaaggaaaagacggccgtttccgcggatcattatccggtaaacgtgtc
aacttctccgcacgtacggtcatctcccccgatccgaacctttcgatcggtgaagtcggt
atcccgcttgcgatcgcaaacgagatgtctgttcccgtaagagtgaccaagcaaaacctt
gaggatatgcgtgctctgatccggatcggcccgcacagaccgacccttcgcgacccctgc
ggtgcgaactatgtcaacagacccgacggccgccgtatcagactgatcgccggcgaagaa
ggaaactgcgacacggttgcggaaatgatcgagcccggatggaagatcgacagacagctg
cgtgacggagatatcgttctcttcaaccgtcagccgtctctgcaccgtatgtccatcatg
tcccaccacatcaaagtcatgaacggcagaacgttccgccttaacccggcagtatgtccc
ccgtacaacgcagactttgatggagatgaaatgaacctgcacgttcctcagaccgaggaa
gcacgcgcagaagcagagcttctcgtcgccgttcaggaaaacattctctcgccgcgtttc
ggcggtccgatcatcggcggtcttcacgaccacatctccggtatcttcctgcttacaaac
cagctgaagtggtacacgaagtccgagttcctctatctcctgaaatataccgcaatggaa
caccttcccgaaccgggcaaggtcgaaaacggtattccctactggagcaacaaacaggca
ttctcgatgatcctgccgaaagacgtcaacatgttctacaaagcgacctgctgccggaac
tgcgacccctgtacgaagaacacgttctgtccgaacgatgcattcgtcaggatcgtcgac
ggagaactcatcagcggaaccatcgacaagaagtctgtcggagcaatggacggcgctatc
cttaacaggatcatccgtctccacggcacgcagcgtgcaaaagagtacatcgacgatctg
accaagctctcgatccgtgcgatcatgctgtacggattctcctacggaatcaacgacacc
gatctcggtaaagaagagtacaagcagattcgcgatgtgctcgacactgcagaacacgat
gtcgccaaccgtatcaatatcttcgagcagggacacttagagcccatgcccggaagaacc
cccgaagagacccttgaaatgcaggtcatgaaagagctgggtaaagcccgtgaccggacc
ggtgatatcgcatcccgtcacttaggtttcgaaaactccgctgtggtcatggccgtttcc
ggagctcgcggttcgatgctgaacatcgcacagatggccggttgtatcggtcagcaggca
gtgcgtggtgagcgtatcgttcgtggatacgaagatcgcaccctcccgcacttcaaacgc
agcgacaaaggggccgacgcacacggtttcgtcagaaactcctacaagtccggtctgaac
ccgaccgagttcttcttccatgcaatcggaggtcgtgaaggtcttgtggatactgcggtt
cgtacgtcccagtccggttacctccagcgtcgtatgatcaacgcactgcaggatctcaaa
gtcgcgtatgacggcactgtccgcagtaccggcggaaagatcattcagttcgtctacgga
gaagacggtacagaccccgccaagtcagcttccggtctgccggtcgatgtgaaaggtatt
gctgaatccgttctcaaggaggagatctaa |