Methanocorpusculum labreanum: Mlab_1511
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Entry
Mlab_1511 CDS
T00472
Name
(GenBank) Transcription initiation factor IIB (TFIIB)
KO
K03124
transcription initiation factor TFIIB
Organism
mla
Methanocorpusculum labreanum
Pathway
mla03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mla00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Mlab_1511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mla03021
]
Mlab_1511
Transcription machinery [BR:
mla03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Mlab_1511
Prokaryotic type
Archaeal type
TFB
Mlab_1511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Cas12f1-like_TNB
Ribosomal_S27e
Lar_restr_allev
Zn_ribbon_LysW
Zn_ribbon_SprT
HTH_AsnC-type
FtrD-like
DZR
GFA
Zn_ribbon_IS1595
UPF0253
BRF2-like_C_cyclin_rpt
DUF5817
Zn_ribbon_8
Trm112p
Motif
Other DBs
NCBI-ProteinID:
ABN07675
UniProt:
A2STL9
LinkDB
All DBs
Position
complement(1546921..1547943)
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AA seq
340 aa
AA seq
DB search
METEIEKLKQLRADREKMKQRQETTLVTREKEKQGGNDATATVCPECGSKQLVHDYERAE
LVCQHCGLVLDDDFIDRGPEWRAFDHDQRMKRSRVGAPMTFTIHDKGLSTMIDWRNRDSY
GRAISSKNRAQLYRLRKWQRRIRVSNATERNLAFALSELDRMASALGLPRNVRETAAVVY
RDAVDKNLIRGRSIEGVAAAALYAACRQCNVPRTLDEIAEVSRVSRKEIGRTYRFISREL
GLKLLPTSPGDYVPRFCSGLGLKGEVQSRAMEILKQAGERELTSGRGPTGVAAAAIYISS
ILSGERRTQREVADVAGVTEVTIRNRYKELAEQLDIEIIL
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgaaattgaaaaactgaaacagctacgagcagatagagaaaaaatgaaacag
cgtcaggaaacgacgcttgttacgagggaaaaggagaagcagggtggaaacgatgcgacg
gcgacggtctgtccggagtgcgggagcaagcagctcgttcatgattatgagcgtgcagag
cttgtctgtcagcactgcggtcttgttttagatgacgatttcattgaccgcgggccggaa
tggcgtgcatttgatcatgatcagcggatgaagagatcgcgtgtcggcgcaccaatgacc
tttacgatccatgataaaggtctttccaccatgatcgactggagaaaccgtgatagttac
gggcgtgcgatctcgtcgaagaatcgggctcagttatatcgtctgagaaaatggcagcgt
cgtatcagagtttccaatgcgacagagcgtaacctggcattcgcactttctgaacttgat
cgaatggcctccgctcttggtcttccgcgaaatgttcgcgagaccgcagcagtcgtttac
cgtgacgccgtcgataagaatctgattcgcggaagaagtattgagggcgttgcagccgct
gcgttgtatgctgcctgccgtcagtgtaatgttccaagaacgctcgacgagatcgctgaa
gtgtcccgtgtttccagaaaagagatcggcaggacttaccggttcatctcccgtgaactt
ggattgaaacttctcccgacttcccctggcgactatgttccaaggttctgctcaggtctc
ggtctgaaaggtgaggtccagtctcgtgcaatggagattttaaaacaggctggcgagcgt
gaacttacgagcggacggggtccgaccggcgttgcagccgctgcgatctacatctcctcg
attctttcaggagaacgcaggacccagcgcgaagttgccgatgtggccggcgtaacggaa
gttacgatccgtaacagatacaaggaactggctgaacaactggatatcgagattatctta
taa
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